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NECEvent2014_3_3_scaffold_461_8

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(8766..9050)

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase omega chain (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 1.00e-46
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 5.10e-46
DNA-directed RNA polymerase subunit omega n=4 Tax=Bifidobacterium dentium RepID=D2Q9C0_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 3.70e-46

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCATTCGGCACTCAGCCAACCCCGACCGGACTTGCGGATCCGCCGATCGACGATCTGATGGAGCATGCGGACTCCAAGTACGCCTTGGCTATTTTCGCCGCCAAGCGTGCTCGCCAGATCAATTCCTACTTTACCCAGCTCAATGAGGGTCTGCTGCAGAACGTCGGCCCGCTGGTGGAGTACCAGAACCAGGAAAAGCCGTTGTCCATCGCGTTCCGCGAGATCAACGATGGTCTGCTGGAGGAGACCCTCGGCGAGGACGACCTGACCGAAGGCAACTGA
PROTEIN sequence
Length: 95
MAFGTQPTPTGLADPPIDDLMEHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNQEKPLSIAFREINDGLLEETLGEDDLTEGN*