ggKbase | organisms

NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

NECEvent2014_3_3_Clostridium_31_9

In projects: NECEvent2014_3_3

Consensus taxonomy: Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Metagenomic Context

Parent: NECEvent2014_3_3_UNK

Properties

Avg. coverage: 8.64 Longest contig: 24.44 Kbp Bin length: 3.31 Mbp GC content: 31.27 %

Contigs count: 723 Features count: 3690 rRNAs count: 1 tRNAs count: 30

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3

Description

May be a relatively novel Clostridium (see 16S rRNA) and rpL9

Displaying items 601-650 of 723 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
NECEvent2014_3_3_scaffold_3475 173_001_scaffold_3475 Species: Clostridium ultunense (100%)	2	1537 bp	27.98	10.83	99.54
NECEvent2014_3_3_scaffold_4181 173_001_scaffold_4181 Species: Clostridium ultunense (100%)	2	1251 bp	27.66	6.00	93.29
NECEvent2014_3_3_scaffold_1941 173_001_scaffold_1941 Species: Paenibacillus sp. FSL H7-0357 (50%)	2	2735 bp	30.02	7.57	73.93
NECEvent2014_3_3_scaffold_3478 173_001_scaffold_3478 Species: Clostridium ultunense (50%)	2	1535 bp	30.42	8.40	96.55
NECEvent2014_3_3_scaffold_2969 173_001_scaffold_2969 Species: Clostridium autoethanogenum (50%)	2	1810 bp	30.88	8.12	93.65
NECEvent2014_3_3_scaffold_3994 173_001_scaffold_3994 Species: Clostridium ultunense (50%)	2	1318 bp	28.00	6.94	100.15
NECEvent2014_3_3_scaffold_3740 173_001_scaffold_3740 Species: Caloranaerobacter azorensis (50%)	2	1424 bp	33.64	9.80	87.22
NECEvent2014_3_3_scaffold_1182 173_001_scaffold_1182 Species: Gottschalkia acidurici (50%)	2	4443 bp	33.85	8.31	96.69
NECEvent2014_3_3_scaffold_2462 173_001_scaffold_2462 Species: Clostridiales bacterium S5-A11 (50%)	2	2184 bp	29.62	5.91	93.41
NECEvent2014_3_3_scaffold_2720 173_001_scaffold_2720 Species: Clostridium ultunense (100%)	2	1977 bp	26.81	8.35	92.56
NECEvent2014_3_3_scaffold_4196 173_001_scaffold_4196 Species: Clostridium ultunense (50%)	2	1245 bp	32.21	5.42	91.57
NECEvent2014_3_3_scaffold_3495 173_001_scaffold_3495 Species: Gottschalkia acidurici (100%)	2	1524 bp	29.33	5.91	100.39
NECEvent2014_3_3_scaffold_2474 173_001_scaffold_2474 Species: Treponema phagedenis (50%)	2	2177 bp	29.17	7.99	80.62
NECEvent2014_3_3_scaffold_4460 173_001_scaffold_4460 Species: Clostridium tetani (50%)	2	1170 bp	23.50	5.90	36.92
NECEvent2014_3_3_scaffold_2221 173_001_scaffold_2221 Species: Alkaliphilus oremlandii (50%)	2	2403 bp	31.25	7.87	88.89
NECEvent2014_3_3_scaffold_3245 173_001_scaffold_3245 Species: Caldanaerobacter subterraneus (50%)	2	1654 bp	27.27	6.53	87.79
NECEvent2014_3_3_scaffold_3502 173_001_scaffold_3502 Species: Clostridium ultunense (50%)	2	1521 bp	29.52	6.31	99.21
NECEvent2014_3_3_scaffold_2481 173_001_scaffold_2481 Species: Clostridium ultunense (50%)	2	2166 bp	23.82	7.83	88.78
NECEvent2014_3_3_scaffold_5018 173_001_scaffold_5018 Species: Clostridium ultunense (100%)	2	1006 bp	31.21	7.75	88.57
NECEvent2014_3_3_scaffold_1972 173_001_scaffold_1972 Species: Lachnoclostridium phytofermentans (50%)	2	2683 bp	28.40	6.93	58.81
NECEvent2014_3_3_scaffold_2742 173_001_scaffold_2742 Species: [Clostridium] saccharolyticum (50%)	2	1957 bp	31.73	7.59	95.66
NECEvent2014_3_3_scaffold_1722 173_001_scaffold_1722 Species: GWF2_Clostridiales_38_85_curated (50%)	2	3116 bp	29.72	7.99	59.21
NECEvent2014_3_3_scaffold_1982 173_001_scaffold_1982 Species: Filifactor alocis (50%)	2	2659 bp	29.82	7.11	98.83
NECEvent2014_3_3_scaffold_3262 173_001_scaffold_3262 Species: Clostridium ultunense (50%)	2	1645 bp	32.28	6.38	84.07
NECEvent2014_3_3_scaffold_1984 173_001_scaffold_1984 Species: Gottschalkia acidurici (50%)	2	2656 bp	29.33	7.23	47.21
NECEvent2014_3_3_scaffold_1985 173_001_scaffold_1985 Species: Moorella glycerini (50%)	2	2654 bp	27.20	8.82	89.30
NECEvent2014_3_3_scaffold_3521 173_001_scaffold_3521 Species: Clostridium ultunense (100%)	2	1515 bp	29.83	7.52	96.24
NECEvent2014_3_3_scaffold_1732 173_001_scaffold_1732 Species: Clostridium ultunense (100%)	2	3093 bp	30.33	6.89	95.54
NECEvent2014_3_3_scaffold_4233 173_001_scaffold_4233 Species: Clostridium botulinum (50%)	2	1236 bp	24.11	6.80	100.49
NECEvent2014_3_3_scaffold_4745 173_001_scaffold_4745 Species: Clostridium ultunense (100%)	2	1080 bp	35.65	8.19	99.44
NECEvent2014_3_3_scaffold_1737 173_001_scaffold_1737 Species: Clostridium ultunense (50%)	2	3086 bp	33.93	7.92	89.44
NECEvent2014_3_3_scaffold_2761 173_001_scaffold_2761 Species: Clostridium ultunense (100%)	2	1943 bp	33.81	7.72	97.89
NECEvent2014_3_3_scaffold_3018 173_001_scaffold_3018 Species: Clostridium sporogenes (50%)	2	1779 bp	31.42	7.25	97.47
NECEvent2014_3_3_scaffold_2763 173_001_scaffold_2763 Species: Clostridium ljungdahlii (50%)	2	1942 bp	29.71	8.88	80.33
NECEvent2014_3_3_scaffold_4237 173_001_scaffold_4237 Species: Caloranaerobacter azorensis (50%)	2	1234 bp	30.71	5.71	77.07
NECEvent2014_3_3_scaffold_2254 173_001_scaffold_2254 Species: Clostridium ultunense (50%)	2	2369 bp	29.59	10.57	79.91
NECEvent2014_3_3_scaffold_2516 173_001_scaffold_2516 Species: Clostridium ultunense (50%)	2	2140 bp	31.12	7.22	93.08
NECEvent2014_3_3_scaffold_5052 173_001_scaffold_5052 Species: Clostridium ultunense (100%)	2	1000 bp	27.80	6.00	82.20
NECEvent2014_3_3_scaffold_2265 173_001_scaffold_2265 Species: Clostridium ultunense (100%)	2	2361 bp	32.95	6.35	94.16
NECEvent2014_3_3_scaffold_4252 173_001_scaffold_4252 Species: Thermobrachium celere (50%)	2	1230 bp	28.46	6.83	77.56
NECEvent2014_3_3_scaffold_2527 173_001_scaffold_2527 Species: Clostridium ultunense (100%)	2	2129 bp	31.42	8.95	92.58
NECEvent2014_3_3_scaffold_2272 173_001_scaffold_2272 Species: Clostridium ultunense (50%)	2	2353 bp	30.47	6.76	86.83
NECEvent2014_3_3_scaffold_3809 173_001_scaffold_3809 Species: Clostridium ultunense (50%)	2	1391 bp	27.89	6.90	90.15
NECEvent2014_3_3_scaffold_2531 173_001_scaffold_2531 Species: Clostridium botulinum (100%)	2	2128 bp	33.22	6.48	94.03
NECEvent2014_3_3_scaffold_4007 173_001_scaffold_4007 Species: Caldisalinibacter kiritimatiensis (50%)	2	1313 bp	33.28	8.34	98.25
NECEvent2014_3_3_scaffold_4263 173_001_scaffold_4263 Species: Caldisalinibacter kiritimatiensis (100%)	2	1227 bp	29.50	10.15	98.04
NECEvent2014_3_3_scaffold_4010 173_001_scaffold_4010 Species: Clostridium botulinum (50%)	2	1312 bp	26.98	6.86	55.79
NECEvent2014_3_3_scaffold_3562 173_001_scaffold_3562 Species: Pontibacillus litoralis (50%)	2	1497 bp	32.06	8.52	78.76
NECEvent2014_3_3_scaffold_3563 173_001_scaffold_3563 Species: Clostridium ultunense (50%)	2	1497 bp	31.93	7.41	98.80
NECEvent2014_3_3_scaffold_2801 173_001_scaffold_2801 Species: Clostridium ultunense (100%)	2	1914 bp	33.70	8.46	76.96

Displaying items 601-650 of 723 in total

NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help