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NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

NECEvent2014_3_3_Clostridium_31_9
In projects: NECEvent2014_3_3

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_3_3_UNK

Properties

Avg. coverage: 8.64 Longest contig: 24.44 Kbp Bin length: 3.31 Mbp GC content: 31.27 %
Contigs count: 723 Features count: 3690 rRNAs count: 1 tRNAs count: 30

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3

Description

May be a relatively novel Clostridium (see 16S rRNA) and rpL9

Displaying items 201-250 of 723 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_3_scaffold_2739 173_001_scaffold_2739
Order: Clostridiales (66.67%)
3 1960 bp 32.70 7.50 88.93
NECEvent2014_3_3_scaffold_2378 173_001_scaffold_2378
Species: Clostridium ultunense (100%)
3 2256 bp 29.79 7.51 90.56
NECEvent2014_3_3_scaffold_1192 173_001_scaffold_1192
Species: Clostridium ultunense (100%)
4 4413 bp 30.77 7.51 96.47
NECEvent2014_3_3_scaffold_952 173_001_scaffold_952
Order: Clostridiales (85.71%)
7 5636 bp 30.50 7.51 80.70
NECEvent2014_3_3_scaffold_2361 173_001_scaffold_2361
Order: Clostridiales (66.67%)
3 2274 bp 29.38 7.52 96.83
NECEvent2014_3_3_scaffold_1358 173_001_scaffold_1358
Species: Clostridium ultunense (80%)
5 3927 bp 31.58 7.52 92.82
NECEvent2014_3_3_scaffold_3521 173_001_scaffold_3521
Species: Clostridium ultunense (100%)
2 1515 bp 29.83 7.52 96.24
NECEvent2014_3_3_scaffold_2803 173_001_scaffold_2803
Species: Clostridium ultunense (66.67%)
3 1914 bp 26.23 7.52 93.73
NECEvent2014_3_3_scaffold_1086 173_001_scaffold_1086
Genus: Clostridium (66.67%)
6 4810 bp 29.52 7.55 61.87
NECEvent2014_3_3_scaffold_769 173_001_scaffold_769
Species: Clostridium ultunense (77.78%)
9 6913 bp 30.57 7.55 98.51
NECEvent2014_3_3_scaffold_832 173_001_scaffold_832
Species: Clostridium ultunense (81.82%)
11 6398 bp 29.20 7.57 95.09
NECEvent2014_3_3_scaffold_1941 173_001_scaffold_1941
Species: Paenibacillus sp. FSL H7-0357 (50%)
2 2735 bp 30.02 7.57 73.93
NECEvent2014_3_3_scaffold_2583 173_001_scaffold_2583
Order: Clostridiales (66.67%)
3 2080 bp 28.70 7.57 78.46
NECEvent2014_3_3_scaffold_1220 173_001_scaffold_1220
Order: Clostridiales (66.67%)
3 4354 bp 31.30 7.58 93.78
NECEvent2014_3_3_scaffold_1754 173_001_scaffold_1754
Order: Clostridiales (66.67%)
3 3046 bp 28.76 7.58 76.13
NECEvent2014_3_3_scaffold_1692 173_001_scaffold_1692
Species: Clostridium ultunense (75%)
4 3162 bp 29.29 7.59 94.02
NECEvent2014_3_3_scaffold_2742 173_001_scaffold_2742
Species: [Clostridium] saccharolyticum (50%)
2 1957 bp 31.73 7.59 95.66
NECEvent2014_3_3_scaffold_513 173_001_scaffold_513
Species: Clostridium ultunense (63.64%)
11 9802 bp 30.12 7.59 84.26
NECEvent2014_3_3_scaffold_943 173_001_scaffold_943
Species: Clostridium ultunense (83.33%)
6 5704 bp 31.26 7.60 96.62
NECEvent2014_3_3_scaffold_1302 173_001_scaffold_1302
Order: Clostridiales (100%)
4 4065 bp 29.72 7.60 50.04
NECEvent2014_3_3_scaffold_1558 173_001_scaffold_1558
Species: Clostridium ultunense (50%)
4 3436 bp 27.74 7.60 74.83
NECEvent2014_3_3_scaffold_838 173_001_scaffold_838
Genus: Clostridium (50%)
8 6363 bp 29.25 7.61 89.58
NECEvent2014_3_3_scaffold_669 173_001_scaffold_669
Species: Clostridium ultunense (60%)
10 7821 bp 31.47 7.61 81.63
NECEvent2014_3_3_scaffold_728 173_001_scaffold_728
Genus: Clostridium (50%)
6 7290 bp 30.32 7.61 89.46
NECEvent2014_3_3_scaffold_1819 173_001_scaffold_1819
Species: Peptostreptococcaceae bacterium AS15 (50%)
2 2918 bp 29.10 7.61 90.37
NECEvent2014_3_3_scaffold_774 173_001_scaffold_774
Species: Clostridium ultunense (83.33%)
6 6866 bp 31.40 7.62 97.92
NECEvent2014_3_3_scaffold_815 173_001_scaffold_815
Order: Clostridiales (60%)
5 6527 bp 27.09 7.63 86.23
NECEvent2014_3_3_scaffold_2652 173_001_scaffold_2652
Species: Caldisalinibacter kiritimatiensis (50%)
2 2024 bp 31.18 7.63 100.05
NECEvent2014_3_3_scaffold_498 173_001_scaffold_498
Order: Clostridiales (55.56%)
9 10056 bp 29.42 7.64 89.89
NECEvent2014_3_3_scaffold_822 173_001_scaffold_822
Species: Clostridium ultunense (75%)
4 6471 bp 31.28 7.65 94.11
NECEvent2014_3_3_scaffold_2554 173_001_scaffold_2554
Species: Clostridium ultunense (50%)
2 2117 bp 27.44 7.65 93.39
NECEvent2014_3_3_scaffold_706 173_001_scaffold_706
Species: Clostridium ultunense (60%)
5 7517 bp 33.03 7.66 97.90
NECEvent2014_3_3_scaffold_4906 173_001_scaffold_4906
Species: Clostridium ultunense (50%)
2 1037 bp 31.53 7.67 93.44
NECEvent2014_3_3_scaffold_2205 173_001_scaffold_2205
Genus: Clostridium (66.67%)
3 2420 bp 29.63 7.69 87.27
NECEvent2014_3_3_scaffold_620 173_001_scaffold_620
Species: Clostridium ultunense (77.78%)
9 8411 bp 29.20 7.70 92.59
NECEvent2014_3_3_scaffold_509 173_001_scaffold_509
Phylum: Firmicutes (80%)
15 9839 bp 30.40 7.70 96.53
NECEvent2014_3_3_scaffold_1160 173_001_scaffold_1160
Genus: Clostridium (50%)
4 4532 bp 29.46 7.71 85.00
NECEvent2014_3_3_scaffold_1032 173_001_scaffold_1032
Order: Clostridiales (80%)
5 5099 bp 32.16 7.71 80.25
NECEvent2014_3_3_scaffold_2761 173_001_scaffold_2761
Species: Clostridium ultunense (100%)
2 1943 bp 33.81 7.72 97.89
NECEvent2014_3_3_scaffold_2881 173_001_scaffold_2881
Order: Clostridiales (50%)
4 1862 bp 29.81 7.73 92.64
NECEvent2014_3_3_scaffold_719 173_001_scaffold_719
Species: Clostridium ultunense (85.71%)
7 7354 bp 30.26 7.73 94.97
NECEvent2014_3_3_scaffold_1505 173_001_scaffold_1505
Genus: Clostridium (75%)
4 3569 bp 27.40 7.73 89.52
NECEvent2014_3_3_scaffold_1264 173_001_scaffold_1264
Order: Clostridiales (50%)
4 4212 bp 30.63 7.73 94.23
NECEvent2014_3_3_scaffold_1534 173_001_scaffold_1534
Species: Clostridium ultunense (100%)
4 3493 bp 30.83 7.73 85.37
NECEvent2014_3_3_scaffold_3798 173_001_scaffold_3798
Species: Clostridium ultunense (100%)
3 1396 bp 31.02 7.74 88.11
NECEvent2014_3_3_scaffold_3106 173_001_scaffold_3106
Species: Clostridium ultunense (50%)
2 1724 bp 29.70 7.74 99.36
NECEvent2014_3_3_scaffold_1603 173_001_scaffold_1603
Species: Clostridium sp. IBUN13A (75%)
4 3347 bp 25.69 7.75 94.74
NECEvent2014_3_3_scaffold_5018 173_001_scaffold_5018
Species: Clostridium ultunense (100%)
2 1006 bp 31.21 7.75 88.57
NECEvent2014_3_3_scaffold_1488 173_001_scaffold_1488
Genus: Clostridium (83.33%)
6 3602 bp 25.82 7.75 73.88
NECEvent2014_3_3_scaffold_1906 173_001_scaffold_1906
Species: Clostridium ultunense (100%)
3 2784 bp 33.08 7.76 84.38
Displaying items 201-250 of 723 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.