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NECEvent2014_3_3_scaffold_4553_1

Organism: NECEvent2014_3_3_Clostridium_sporogenes_rel_30_4_partial

partial RP 23 / 55 MC: 1 BSCG 18 / 51 ASCG 3 / 38
Location: comp(59..799)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 246.0
  • Bit_score: 496
  • Evalue 2.50e-137
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 246.0
  • Bit_score: 459
  • Evalue 6.90e-127
tRNA pseudouridine synthase A n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T365_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 497
  • Evalue 6.30e-138
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
GTGAAAAATATAAAGTTAAAACTTGAATATGATGGAACAAATTATTGTGGATGGCAAAAACAAAAAAATGAAAAATTTATTACATTACAAGGTACGTTAGAGAAGGTTATAAGTAATATAACTAAAGAAAAAGTAGAAATTACAGGAGCAAGTAGAACTGATTCAGGGGTTCACGCTAAAGGATATATGTGTAATTTTTTTACTAATTCTAGAATACCGCCTGAAAATTTACAAAGAGTAATTAATAATAATTTACCACCAGATATAGTAGTTTTAAGTTCAGAAGAAGTTAGTAGTGAATTTCATTCTAGATTTTGTAGTAAGGGCAAAACTTATGAATATACAATTTTAAATAAATCTGAACCTATAGCTATAGGAAGAAATTATGTTTTCCATTTTAAATATAAACTTGATATAGATAAAATGAAAATAGCATCAAAATATTTTATAGGAACACATGATTTTTCTGCATTTCAAACAAAAGGAAGTAGTGTGAAAACCTCAGTGAGAACCATAAGTAAATTTGAAATAAATAAAAGCGGTGATCTTATAAAGTTTATAATTACAGGTGATGGTTTTCTTTATAACATGGTAAGAATAATAGTAGGTACATTGATAGAAATTGGATTAAATAAAAGAGAACCAGAATATATAGAGTATGTTATAAAATCAAAAGACAGAAGGAAAGCAGGTAAATGTGTGCCTTCATCTGGGCTGTGTTTAAAGGAAGTATTTTATTAA
PROTEIN sequence
Length: 247
VKNIKLKLEYDGTNYCGWQKQKNEKFITLQGTLEKVISNITKEKVEITGASRTDSGVHAKGYMCNFFTNSRIPPENLQRVINNNLPPDIVVLSSEEVSSEFHSRFCSKGKTYEYTILNKSEPIAIGRNYVFHFKYKLDIDKMKIASKYFIGTHDFSAFQTKGSSVKTSVRTISKFEINKSGDLIKFIITGDGFLYNMVRIIVGTLIEIGLNKREPEYIEYVIKSKDRRKAGKCVPSSGLCLKEVFY*