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NECEvent2014_3_3_scaffold_4960_1

Organism: NECEvent2014_3_3_Clostridium_sporogenes_rel_30_4_partial

partial RP 23 / 55 MC: 1 BSCG 18 / 51 ASCG 3 / 38
Location: 273..845

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TAM2_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 190.0
  • Bit_score: 374
  • Evalue 8.10e-101
  • rbh
Sigma-70 region 2 {ECO:0000313|EMBL:EDU39193.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 190.0
  • Bit_score: 373
  • Evalue 2.50e-100
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 190.0
  • Bit_score: 367
  • Evalue 2.10e-99

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
TTGGGACTGAGTGATGAAGAATTGGTTAATGAAATTATTAGTGGAAACCAATCTGCTATGGAAGTACTTGTAAGTAGAAATTATAAATTGGTATATGCTTTTATATATAGAAATGTAGGAGAGTATCATACTACACTGGATTTGTCTCAGGAGAGCTTTATAAAAATTATGAAAAACTTAAAAATCTTTAAAAGTCATAAAGGTAATTTTCAATGTTGGATTTTGAAGATAGCTTTAAATATTTGTAAAGATTATTGGAAAAGCGCTTATGTTAAACATAACACTGTTGATGACAGCTCTTTAGAGCAGGTTTATGAAAAGGAAAATGTTATAAATTATTTAGAAAAGATTGAAGAAAGACAGGAAATTAAAAAAGCCATGATGTTATTGCCAGAAGAACAAAGAGAAGTAGTTATATTAAGATACTATAATGATTTGAAAATAAGGGATATAGCTAATATAACAGAAATAAAGGAGTCCACTGTAAAATCAAGATTAAGGCTTGCTATAGGAAAGCTTAAAACATTATTACAAAGGGGGGATAGTAATGAAAGAAACAAAAGAAGTATTTAA
PROTEIN sequence
Length: 191
LGLSDEELVNEIISGNQSAMEVLVSRNYKLVYAFIYRNVGEYHTTLDLSQESFIKIMKNLKIFKSHKGNFQCWILKIALNICKDYWKSAYVKHNTVDDSSLEQVYEKENVINYLEKIEERQEIKKAMMLLPEEQREVVILRYYNDLKIRDIANITEIKESTVKSRLRLAIGKLKTLLQRGDSNERNKRSI*