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NECEvent2014_3_3_scaffold_4977_2

Organism: NECEvent2014_3_3_Clostridium_sporogenes_rel_30_4_partial

partial RP 23 / 55 MC: 1 BSCG 18 / 51 ASCG 3 / 38
Location: comp(585..1016)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1L1C3_CLOBM similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 101.0
  • Bit_score: 160
  • Evalue 1.80e-36
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 101.0
  • Bit_score: 160
  • Evalue 5.10e-37
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=471871 sp similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 98.0
  • Bit_score: 160
  • Evalue 2.50e-36

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 432
CTTAATATAGATATGCAAGCTGTTTCACATGATGAAGTTATAAAAAATAGTATACCAGTAAAATTTGAAGGAAAAGAACAACTAGAACATAAAGGATTTTTACTAGAGGAATTTACTCCATATATAGAGGTAGCTGGGAAAGTAGGGATACTTCCAGAAATAATAGTAGTAAATGTTGGAGAAAATCAGCCAGGAGATAATATAAAAGTATCAGATATAAAATTAGATGAAGATGAGGTAAGAGTTGGAATTAGTGATAATGGGCTAGGATGTGTAAATTTGATTAAAGGTAATGGATTAATGGGGATAGAGAATAAGGTAAAAGCTTTTGGTGGGAAAATAATTTATAATAGAGAGGAAAAACAAGGATTTAATTTAGGTTTAATCTTTAAATTAAATTATATAGAATGTACTAATGAGGAAGGAAAATAA
PROTEIN sequence
Length: 144
LNIDMQAVSHDEVIKNSIPVKFEGKEQLEHKGFLLEEFTPYIEVAGKVGILPEIIVVNVGENQPGDNIKVSDIKLDEDEVRVGISDNGLGCVNLIKGNGLMGIENKVKAFGGKIIYNREEKQGFNLGLIFKLNYIECTNEEGK*