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NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_4_29

Organism: NECEvent2014_3_4_Veillonella_parvula-rel_38_333_plum

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 33788..36109

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=479436 species="Bacteria; Firmicute similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 773.0
  • Bit_score: 1552
  • Evalue 0.0
  • rbh
DNA topoisomerase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLQ5_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 773.0
  • Bit_score: 1552
  • Evalue 0.0
  • rbh
DNA topoisomerase III similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 773.0
  • Bit_score: 1552
  • Evalue 0.0

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2322
ATGCGGTTATTTATTGCAGAAAAGCCATCCATGGCTCGCGAAATCAGTAAATGCTTACCAGAAAATAAGAATATCCAAAAGCGGAATGGTTATTTTATCCAAGGTGATGATGTGGTGACCTGGGTTGTAGGTCATGTATTGCATCAGGCTGAGCCTGGAGATTACGATGATAAATATATCCGTTGGCGTCCTCAAGATTTGCCTATCGTGCCAGATGAGTGGAAATTGCTTGTCACAGATAGCAGCCGTCAACAGTTTGAGATTGTAAAAGACCTTATCGACAAAGCTGATGTCATCGTCAACGCAGGTGACCCGGATCGGGAAGGGCAACTCTTAGTTGATGAAGTTTTGTACTATGTAGGTAATACAAAACCAGTACAGCGTATTCTATTAAATGCCCTCGATGAAAAATCCATTCGTTCCGCTCTTGATGATTTGAGAGATAACAAGGACTTTCACAATCTATATCAATCTGCATTGGCAAGAGCACGGGCAGACTGGCTCATTGGGATGAATTTATCTCGGGCATATACATTATCTGAACGTTATAAAGGTAATAAGGTAACATTGCCAATTGGTCGTGTAAAGACGCCAACCTTAGCTCTTGTTGTACGTAGAGAACGAGAGTTAGCTGCATTTAAACCAGTAGACTATTTTACTGTAAAGGTATTATATAACCATCCTAATGGGGTGTTTTGGGCCACTTGGCAGCCGACAGATGAGCAAAAAGGATTAGATCCTGATGGTCGTCTCATCAATAAGGCTATAGCTGATTCATTAGTTGAACAATTGCAAAGTGGACCTGATGGTGTTATTAAAGCTGTTACTAAATCCAAAAAGAAAGATGTACAGCGTTTACCGTTATCCCTGTCATCCTTACAGGTACTGGCAGGTAAAGCCTTTTCTTATGATCCACAGACTGTACTTGATACAGCGCAAAAATTATACGAAAAGAAATTAACTACCTATCCACGTTCTGATTGTGAATATTTACCACCCAATCAATATGATGATCGCAATGCAATCCTCAACAATCTACAAAATGCAGGTGATGAGAGATTAGCACAGTGGGCTGCCGATGCAGATCGTTCTATTAAGAGCCGTGCTTGGAATGAAAAGAAAATTACCGCCCATCATGCTATTATTCCTACAACGGTGGCTTGTAATATAAATAGTTTGTCCCAAGAGGAGCGAAATATTTATTTCCTCATCAGTCAAGCTTATATTGCTCAATTTTATGGGGAGCATATTTACGAGCAAACTAAAATTGTAGTAGAACAATGTAAGGAAGAGTTTGTAGCTAATGGTCGTGTAGTTATCGAAGAAGGATGGAAATTGCTTTATAAACGACATAAGTCTAAATCTACGACGGACAATGACGAGCCCGATCTAACCGATGAGCGTGGGGCTGAGTCAGACCCTAAAAAAGAGATTATTGAAGAAACGGACCACTTGCCAGCAGTTAAAAAGAACGATACTATTTTATATACGGATTCTTCTGTAGAGGCTAAACAAACAAAGCCACCATCCCGTTTTACGCCGTCCACATTACTACAAGCGATGAAGGAAATTCATAAATTCGTAAAAAATGAAGATTTGAAAAAACAATTAAAGGCTGTATCTGGTATTGGTACAGAAGCAACGCGGGCAAACATAATTGATGAGCTTATCAGTCGAGGCTTTATGAAAACGTCAGGGAAGAAGCAAGTCTTATCTCCAACGGAAACGGGCTATCTCTTAGTAGATGCTCTGCCAGAAGAGCTGCTTTATCCTGATGAAACAGCTGTTTGGGAAGAACGCTTAGCACTTATGAGCGAAGGAGAGGATACATTAGATTCCTTCTTAGCGGATCAAATTAATTTTTTACAATTATTAATTGATAAACTTGGTTTTGATAAAGTAGTAAACTCTGATCAAATGATGCCAAATGTGGTACGAACTATAACGAGTCAAAATCGTAAGCGCCCTATGGATAGTGAAAGCGTAGACTTGTCTTCCTTACCTGTATGTCCTAAATGTAAAAAAGGACGTTTGCAACAGCGGAATGGTAAATTTGGTGCCTTTTTAGGGTGCACGAATTATCCTACATGTAAACATACGCAGCCAGTAGAAGGGGATACTTCTAGTGTTGAAGGTAATATTGAAGTATCTGATGAAGATAAACAATATAAATGCCCTAGATGTAACGTAGGTTACTTTGTGAAACAAGAGGTGAGAGGTCGAACAAACTGGATTTGTAGTAATCGATCTCAATGTAAGACCCAATGTTCTGACGTAGATGGGGTACCGAGTATTTATGTTAACAAATCTAACATTACTTAG
PROTEIN sequence
Length: 774
MRLFIAEKPSMAREISKCLPENKNIQKRNGYFIQGDDVVTWVVGHVLHQAEPGDYDDKYIRWRPQDLPIVPDEWKLLVTDSSRQQFEIVKDLIDKADVIVNAGDPDREGQLLVDEVLYYVGNTKPVQRILLNALDEKSIRSALDDLRDNKDFHNLYQSALARARADWLIGMNLSRAYTLSERYKGNKVTLPIGRVKTPTLALVVRRERELAAFKPVDYFTVKVLYNHPNGVFWATWQPTDEQKGLDPDGRLINKAIADSLVEQLQSGPDGVIKAVTKSKKKDVQRLPLSLSSLQVLAGKAFSYDPQTVLDTAQKLYEKKLTTYPRSDCEYLPPNQYDDRNAILNNLQNAGDERLAQWAADADRSIKSRAWNEKKITAHHAIIPTTVACNINSLSQEERNIYFLISQAYIAQFYGEHIYEQTKIVVEQCKEEFVANGRVVIEEGWKLLYKRHKSKSTTDNDEPDLTDERGAESDPKKEIIEETDHLPAVKKNDTILYTDSSVEAKQTKPPSRFTPSTLLQAMKEIHKFVKNEDLKKQLKAVSGIGTEATRANIIDELISRGFMKTSGKKQVLSPTETGYLLVDALPEELLYPDETAVWEERLALMSEGEDTLDSFLADQINFLQLLIDKLGFDKVVNSDQMMPNVVRTITSQNRKRPMDSESVDLSSLPVCPKCKKGRLQQRNGKFGAFLGCTNYPTCKHTQPVEGDTSSVEGNIEVSDEDKQYKCPRCNVGYFVKQEVRGRTNWICSNRSQCKTQCSDVDGVPSIYVNKSNIT*