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NECEvent2014_3_4_scaffold_355_22

Organism: NECEvent2014_3_4_Citrobacter_KTE32-rel_52_77

partial RP 41 / 55 MC: 2 BSCG 35 / 51 ASCG 13 / 38 MC: 2
Location: comp(19455..21542)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 695.0
  • Bit_score: 1353
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 695.0
  • Bit_score: 1351
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=R8V023_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 695.0
  • Bit_score: 1353
  • Evalue 0.0
  • rbh

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Taxonomy

Citrobacter youngae → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2088
GAAGAGCAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCAGCACAGATTCGTCAGCTGGCCGGTATGCGTGGTCTGATGGCTAAGCCAGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCTACTCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACAGCGAACTCCGGTTATCTGACTCGTCGTCTGGTTGACGTTGCGCAGGACTTGGTTGTTACTGAAGACGATTGCGGCACGCTGGAAGGCATCACCATGACCCCGGTTATCGAGGGTGGTGACGTTAAAGAACCGCTGCGCGATCGCGTTCTGGGTCGTGTGACTGCTGAAGACGTTCTGAAGCCGGGTACGGCGGATATTCTGGTTCCACGCAACACGCTGCTGCACGAACAGTGGTGTGACCTGCTGGAAGAGAACTCCGTTGACTCCGTCAAAGTCCGTTCCGTTGTATCCTGTGACACCGACTTTGGTGTATGTGCGCACTGCTATGGTCGTGACCTGGCGCGTGGCCACATCATCAATAAAGGTGAAGCAATCGGCGTTATCGCGGCACAGTCCATCGGTGAACCGGGTACACAGTTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAATCCAGCATCCAGGTGAAAAATAAAGGTAGCATCCGTCTGAGCAATGCGAAGTCGGTTGTTAACTCCAGCGGTAAACTGGTTATCACCTCACGTAACACCGAACTGAAACTGATCGACGAATTCGGCCGTACCAAAGAAAGCTATAAAGTGCCTTACGGCTCCGTTATGGCGAAAGGTGATGGCGAACAGGTTGCTGGCGGCGAAACCGTAGCGAACTGGGATCCGCACACCATGCCGGTTATCACCGAAGTGAGTGGTTTCGTCCGCTTCACTGACATGATCGACGGCCAGACCATTACTCGTCAGACCGACGAACTGACCGGTCTGTCTTCTCTGGTGGTTCTGGATTCTGCAGAACGTACTGCGGGTGGTAAAGACCTGCGTCCGGCACTGAAAATTGTTGATGCTCAGGGCAACGACGTTCTGATCCCAGGCACCGATATGCCTGCTCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGTTCTGGTGACACCCTGGCGCGTGTTCCGCAGGAATCCGGCGGTACCAAGGATATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGCATCATTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGAGCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTTGTTTCCGACGGTCCGGAAGCGCCGCACGACATCCTGCGTCTGCGTGGTGTGCATGCTGTAACTCGTTATATCGTTAACGAAGTTCAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAGCACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCCACCATCGAAAGCGCTGGTAGCTCCGACTTCCTGGAAGGCGAGCAGGTTGAATACTCCCGCGTCAAGATTGCTAACCGCGATCTGGAAGCGAACGGCAAAGTGGGTGCAACATTCTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCGACCGAGTCCTTCATCTCTGCAGCATCGTTCCAGGAAACCACGCGTGTCCTGACCGAAGCCGCTGTTGCAGGTAAACGTGATGAACTGCGCGGTCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCGGGTACCGGTTATGCGTACCACCAGGATCGTATGCGCCGCCGCGCAGCGGGCGAACTGCCAGCTGCTCCGCAGGTGACTGCTGAAGATGCGTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGCCTGGGTGGTTCTGACAACGATTAA
PROTEIN sequence
Length: 696
EEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRLSNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRDLEANGKVGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVTAEDASASLAELLNAGLGGSDND*