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NECEvent2014_3_4_scaffold_308

Alias: 173_002_scaffold_308

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_308_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
Transaldolase {ECO:0000313|EMBL:KHD16458.1}; EC=2.2.1.2 {ECO:0000313|EMBL:KHD16458.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Z2_CLOBU
NECEvent2014_3_4_scaffold_308_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(445..1593)
DNA (1149bp) protein (383aa)
Xylulose kinase {ECO:0000313|EMBL:KJZ96457.1}; EC=2.7.1.17 {ECO:0000313|EMBL:KJZ96457.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
ROK family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0U5_CLOBU rbh
ROK family protein
NECEvent2014_3_4_scaffold_308_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1686..3194)
DNA (1509bp) protein (503aa)
Xylulokinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI73_CLOBU rbh
Oxidoreductase of aldo/keto reductase family, subgroup 1 {ECO:0000313|EMBL:KJZ96453.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
xylulokinase
NECEvent2014_3_4_scaffold_308_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3368..4312)
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1523156 species="Bacteria; Firmicutes;
Malate/lactate dehydrogenases (EC:1.1.1.27)
UPI00039DDD15 related cluster n=1 Tax=unknown RepID=UPI00039DDD15 rbh
NECEvent2014_3_4_scaffold_308_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4623..5636
DNA (1014bp) protein (338aa)
UPI0003D66853 related cluster n=1 Tax=unknown RepID=UPI0003D66853 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96444.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
metallophosphoesterase
NECEvent2014_3_4_scaffold_308_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5706..7169)
DNA (1464bp) protein (488aa)
UPI0003D6592D related cluster n=1 Tax=unknown RepID=UPI0003D6592D rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88071.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_308_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7280..7756)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K0V0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86706.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_308_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8028..12446)
DNA (4419bp) protein (1473aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1523156 species="Bacteria; Firmicu
DNA polymerase III polC-type n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI68_CLOBU rbh
polC; DNA polymerase III (alpha subunit)
NECEvent2014_3_4_scaffold_308_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12711..14294)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YW68_CLOBU rbh
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster {ECO:0000313|EMBL:KJZ86686.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
amidohydrolase
NECEvent2014_3_4_scaffold_308_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14569..15537
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWN0_CLOBU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ86657.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_4_scaffold_308_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15791..16720)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC4_CLOBU rbh
Putative DNA polymerase III epsilon chain {ECO:0000313|EMBL:KJZ86696.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
NECEvent2014_3_4_scaffold_308_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17034..18275)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A5U9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96465.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative voltage gated chloride channel family
NECEvent2014_3_4_scaffold_308_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18493..20079)
DNA (1587bp) protein (529aa)
Alpha/beta superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JE77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86685.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alpha/beta superfamily hydrolase
NECEvent2014_3_4_scaffold_308_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20323..21741)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFI3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86688.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_308_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21738..22427)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein ResD n=4 Tax=Clostridium butyricum RepID=B1R0U9_CLOBU rbh
Two-component response regulator {ECO:0000313|EMBL:KJZ86703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
transcriptional regulatory protein ResD
NECEvent2014_3_4_scaffold_308_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22568..24514)
DNA (1947bp) protein (649aa)
Molybdopterin oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8K905_CLOBU rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KJZ86680.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
molybdopterin oxidoreductase Fe4S4 domain protein
NECEvent2014_3_4_scaffold_308_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24680..25396
DNA (717bp) protein (239aa)
UPI0003D68AB7 related cluster n=1 Tax=unknown RepID=UPI0003D68AB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88389.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
response regulator
NECEvent2014_3_4_scaffold_308_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25399..26820
DNA (1422bp) protein (474aa)
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JE81_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96446.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_4_scaffold_308_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26920..27336
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFI6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31821.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 19 items

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