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NECEvent2014_3_4_scaffold_327_11

Organism: NECEvent2014_3_4_Clostridium_butyricum_28_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(11245..11856)

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 183.0
  • Bit_score: 353
  • Evalue 4.40e-95
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHT5_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 183.0
  • Bit_score: 361
  • Evalue 7.50e-97
  • rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ97585.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 187.0
  • Bit_score: 360
  • Evalue 1.40e-96

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Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
ATGTTGCAGAAGGAAAAGTTATTTATTAACGGACAATGTAAGTATAAGGGAGAGTTTATTATGAATTTGATTAAAACTAAATTAGATGGTGTATATATAGTAGAGCCACAGGTCTTTGGAGATGAAAGAGGATGGTTTATGGAAACCTATTCGGCAATAAAAACTCCAGAAATAGTGTGTGATTTTGTTCAAGACAATCAATCATATTCAAAAGAAAAGGGAATACTTAGAGGAATTCATTTCCAAAATGGTGAGCATGCTCAAGCTAAGCTTGTTAGAGTTGTTAAAGGTGCTGTACTTGATGTTGCTGTTGATTTAAGAAAGGGATCACCTACTTATAAGCAATGGGTTGCTGTTGAACTTTCTGCAGAGAATAAAAAACAATTATTTATTCCAAGAGGTTTTGGCCATGGATTTGTTACTTTAAGTAATGATGTTGAATTTGTATATAAAACAGATAATTATTATAACCATGAAAGTGATAGAAGCATTAGGTTTGATGATCCAGAAATTGGAGTTGAATGGGGGATAGAAAACCCAATTCTTTCCGAAAAGGATAAAAAAGCACCATTATTGAAGGATAGTGATTGTACTTTTATATATAAAGAATAA
PROTEIN sequence
Length: 204
MLQKEKLFINGQCKYKGEFIMNLIKTKLDGVYIVEPQVFGDERGWFMETYSAIKTPEIVCDFVQDNQSYSKEKGILRGIHFQNGEHAQAKLVRVVKGAVLDVAVDLRKGSPTYKQWVAVELSAENKKQLFIPRGFGHGFVTLSNDVEFVYKTDNYYNHESDRSIRFDDPEIGVEWGIENPILSEKDKKAPLLKDSDCTFIYKE*