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NECEvent2014_3_4_scaffold_1507_3

Organism: NECEvent2014_3_4_Bifidobacterium_MSTE12-rel_58_13

near complete RP 51 / 55 MC: 4 BSCG 49 / 51 ASCG 13 / 38
Location: 2182..2418

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q5L4_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 9.90e-37
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETO95798.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 162
  • Evalue 2.80e-37
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 2.80e-37

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGGATTGCGTGAACGGCGTGAGCGTTGCGGGTTGACGTTGCTCCAGTTGGAAGCGTTGACCGGTATCGCCTTCACGCGGTTGAGCACGTTGGAGTGCAATGCGTCCGAGGCTCGCAACATGTATTTGGGTACGGCTCGGCGGATTGCCGACGCGTTGCATTGCAACGTGTTGGACTTGTATCCGGATGAGGATGCGTGGCGTGGCGGCGTGTCCGCCGGTGTGACCGGGTTGAGG
PROTEIN sequence
Length: 79
MGLRERRERCGLTLLQLEALTGIAFTRLSTLECNASEARNMYLGTARRIADALHCNVLDLYPDEDAWRGGVSAGVTGLR