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NECEvent2014_3_4_scaffold_937_5

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: comp(2364..4118)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4D8_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 584.0
  • Bit_score: 1137
  • Evalue 0.0
  • rbh
PAS domain S-box protein {ECO:0000313|EMBL:EDU36343.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 584.0
  • Bit_score: 1137
  • Evalue 0.0
sensory box sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 584.0
  • Bit_score: 1131
  • Evalue 0.0

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1755
ATGAATAGTTCTATAGAATTAATTTATACTGTAAAAAATGTAATGAAGACAGATTTTATAAAAGTACTTAAAAATGAAGCCATATCATCTGCCTTCAATAGAATGGCTAAACTTTATAAAGATGAAGTTCTTATAGTAGATGAAGATGACAATATTATAGGTATATTTACTAAAAATGACCTATATAAATTAGAAAATGAAGGTAAAAGATTTAGTGATAACTTAGAAAATTATATAAAAAGAGATGTAATAACAATTTCTGAAGAGAAATCAATTATTTCTGCAAGAAATATAATGGTTAAAAATAAGATAGAAAGATTACCTATAGTACATAATAGAAAAATAATAGGAATAGTACATTTAGACGATTTAAATAATGAATTATACACAAATGTAGAAGAATTATATGCTCTTCAGGATAGAATTTTAGAGAATATGCATGAGGCAGTATGTATAACAAATAACAAAGGTGTAGTAATATATTGGAATAAAAGTTCGGAAGACCTATATGGTGTGAAGAGACAGGAAATAATAGGAAAATATTTAGGGTCTTTTTTTCCAAATGCTTTAATATTAAAAGTTTTGAAAAAGCCTAGAAAAATAACTAATGTAAACAATGAGCCTTCTCCTGGAAAAACTGTTATATTAAGTGCTGTACCTATATTTAATAGTAAAAACAAATTGATAGCAGTGGCTTCTACAGATAGGGATATAACAGAGGTAATATCTTTATCTAAAGAACTTATGCAGGAAAAAAAGAAGGTGGAATTTTTTGAAAGTGCCTATAAAAAAGAAATAGCTTCAAATTATAGTTTTTCATCTATTATAGGTAAAAGTCAAAAGATAATAGAAAACATTGCTATAGCTAAAAAAGTAGCACCTACCTCTGCTAGCGTTCTTATTACAGGAGAAAGTGGAACGGGAAAAGAGGTTTTTGCAAAAGCTATACATAAAGCTAGTGGGAGAACTGGAAACTTTGTAGCTATAAACTGTAGTGCTATACCTGAAAATCTTTTTGAAAGTGAATTGTTTGGTTATGTGGGAGGAACTTTTACAGGTTCATTAAAAGAAGGGAAAATAGGTAAATTTGAATTTGCTAACAATGGTACTTTATTTTTAGATGAAATAGGGGACATGCCACTTAGTATGCAAGCAAAACTCTTAAGAGTTTTGCAGGATGGTGTGGTTTACAGAATAGGAAGTCAAAAGGGCACAAAGGTTAATTGTAGAATTTTAGCTGCAACAAATAGGGACTTACAATTTATGATAAAGGAAAATACCTTTAGGGAAGACCTATTTTATAGATTTGCAGTAGTGCATATAGAGTTACCTCCATTAAGAGAGAGAAGAGATGATATTAAAGATTTTATAGACTTATTTATAAACCAAATATCAGAAAAGGAAGGCATAAAGATAAATACAATAGATAAAGAGGTTTATGATATTTTATGTTCTTATAAATGGGAAGGGAATATAAGACAATTGAAAAATGTGGTAGAAAGGATGGTAGTTTTATCAACCAATGGAGAAGTAACAATATCTTCTGTTCCTAATCATATAGTGCAGGATGTAGAAGAAATTGAAGGGGAATCTCATCATAGATATGATTTAAATGAAGTAGTTAAAAATACAGAAAAAAAGATAATAAAGGAAGTAATGGAAATAGCTAAAGGGAATAAAAAGAAAGCAGCAGAAATACTTAATATAAAAAGAAGCACTTTATATTATAAATTAAACCAATATGATTTAATTTAA
PROTEIN sequence
Length: 585
MNSSIELIYTVKNVMKTDFIKVLKNEAISSAFNRMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENEGKRFSDNLENYIKRDVITISEEKSIISARNIMVKNKIERLPIVHNRKIIGIVHLDDLNNELYTNVEELYALQDRILENMHEAVCITNNKGVVIYWNKSSEDLYGVKRQEIIGKYLGSFFPNALILKVLKKPRKITNVNNEPSPGKTVILSAVPIFNSKNKLIAVASTDRDITEVISLSKELMQEKKKVEFFESAYKKEIASNYSFSSIIGKSQKIIENIAIAKKVAPTSASVLITGESGTGKEVFAKAIHKASGRTGNFVAINCSAIPENLFESELFGYVGGTFTGSLKEGKIGKFEFANNGTLFLDEIGDMPLSMQAKLLRVLQDGVVYRIGSQKGTKVNCRILAATNRDLQFMIKENTFREDLFYRFAVVHIELPPLRERRDDIKDFIDLFINQISEKEGIKINTIDKEVYDILCSYKWEGNIRQLKNVVERMVVLSTNGEVTISSVPNHIVQDVEEIEGESHHRYDLNEVVKNTEKKIIKEVMEIAKGNKKKAAEILNIKRSTLYYKLNQYDLI*