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NECEvent2014_3_4_scaffold_975_4

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 1188..1547

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=16 Tax=Clostridium RepID=RL20_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 234
  • Evalue 6.30e-59
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 234
  • Evalue 1.80e-59
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 234
  • Evalue 8.70e-59

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCAAGAGTAAAAAGAGCAATGAATGCTCGTAAACGTCATAAAAAAGTATTAAAACTTGCAAAAGGATACTATGGTGGAAAGAGCAAGTTATTTAAAACAGCAAATGAATCAGTTATAAGAGCATTAAGAAATGCTTATGTAGGAAGAAAATTAAAGAAAAGAGATTATAGAAAGTTATGGATAGCAAGAATAAACGCTGCTACAAGAATGAACGGACTTTCATATTCAAAATTCATGAATGGAATAAAGAATGCAGGAATTGATATAAACAGAAAAATGCTTTCAGAAATAGCTATAAATGATCCAAAAGCATTTGCTGAATTAGTAGATGTAGCTAAAAAACAATTAAATGCTTAA
PROTEIN sequence
Length: 120
MARVKRAMNARKRHKKVLKLAKGYYGGKSKLFKTANESVIRALRNAYVGRKLKKRDYRKLWIARINAATRMNGLSYSKFMNGIKNAGIDINRKMLSEIAINDPKAFAELVDVAKKQLNA*