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NECEvent2014_3_4_scaffold_729_5

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: comp(2846..3601)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFA5_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 251.0
  • Bit_score: 485
  • Evalue 3.30e-134
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 251.0
  • Bit_score: 485
  • Evalue 4.60e-134
sigF; sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 251.0
  • Bit_score: 482
  • Evalue 6.00e-134

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
ATGAATAGTGAAAAGGTAATCATGGAAACTAAAAGTTTTGAAGACAACATGGAACTTATGGAAGAGGCAAGATCCGGAAACAAACAAGCTTTAGATAAATTAGTAGAAGTAAATTTACCCTTAGTTTCAGCAATAAGTAAAAAATTTTTAAATAGAGGATATGAATATGATGATATATTTCAAATAGGATGTATAGGTTTAGTAAAGGCTATAAATAATTTCGAAACAAAGTATAATGTGAAATTTTCAACCTATGCAGTTCCTATGATAATGGGAGAAATAAAGAGATTCTTAAGGGATGACGGAATAATAAAAGTAAGTAGAAGTATAAAAACAGCGGCAAAAAAATTACATTATGATAAAGAAAAGCTTTGTAAAGAATTAAATAGAGAACCTACTATAGAAGAATTATCACAGTTTTCAGGATATACTGTAGATGAAATATTAATGGCCACAGAGTCATCAAGTTCCCCTCAATATTTATATGATGTTATACATCAAGATGATGGAGCACCAGTTTTACTTATTGATAAAATAAGTGAAAATACAGAGGAAGATAATAAGATTATAGATAATATAGCATTAAAAGAGGCTCTCAAAAATTTAGATATTAAGTCAAGGCAAATAATAATACTAAGATACTTTAAAGATAAAACTCAAATAGAAGTAGCTAAACAACTAGGAATAAGTCAAGTACAAGTATCAAGAATAGAAAAAAAAGTATTAAAATTAATGAAAGAAAAACTTACTGTATAA
PROTEIN sequence
Length: 252
MNSEKVIMETKSFEDNMELMEEARSGNKQALDKLVEVNLPLVSAISKKFLNRGYEYDDIFQIGCIGLVKAINNFETKYNVKFSTYAVPMIMGEIKRFLRDDGIIKVSRSIKTAAKKLHYDKEKLCKELNREPTIEELSQFSGYTVDEILMATESSSSPQYLYDVIHQDDGAPVLLIDKISENTEEDNKIIDNIALKEALKNLDIKSRQIIILRYFKDKTQIEVAKQLGISQVQVSRIEKKVLKLMKEKLTV*