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NECEvent2014_3_4_Streptococcus_anginosus-rel_39_5

NECEvent2014_3_4_Streptococcus_anginosus_39_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Streptococcus anginosus  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 538 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_2852 173_002_scaffold_2852
Species: Streptococcus intermedius (50%)
2 1032 bp 40.50 2.76 99.42
NECEvent2014_3_4_scaffold_2599 173_002_scaffold_2599
Species: Streptococcus anginosus (100%)
1 1194 bp 41.21 2.89 79.40
NECEvent2014_3_4_scaffold_2398 173_002_scaffold_2398
Species: Streptococcus anginosus (100%)
2 1332 bp 40.92 3.04 99.77
NECEvent2014_3_4_scaffold_1830 173_002_scaffold_1830
Species: Streptococcus anginosus (50%)
2 1906 bp 44.60 3.07 87.99
NECEvent2014_3_4_scaffold_2520 173_002_scaffold_2520
Species: Streptococcus intermedius (100%)
3 1243 bp 29.69 3.26 74.82
NECEvent2014_3_4_scaffold_1616 173_002_scaffold_1616
Species: Streptococcus gallolyticus (100%)
2 2232 bp 26.79 3.36 98.52
NECEvent2014_3_4_scaffold_2863 173_002_scaffold_2863
Species: Streptococcus anginosus (100%)
2 1026 bp 39.86 3.51 100.00
NECEvent2014_3_4_scaffold_2548 173_002_scaffold_2548
Species: Streptococcus anginosus (100%)
1 1226 bp 39.89 3.55 97.39
NECEvent2014_3_4_scaffold_2566 173_002_scaffold_2566
Species: Streptococcus anginosus (100%)
2 1216 bp 39.47 3.58 99.18
NECEvent2014_3_4_scaffold_2002 173_002_scaffold_2002
Species: Streptococcus anginosus (50%)
2 1701 bp 37.57 3.62 71.96
NECEvent2014_3_4_scaffold_1750 173_002_scaffold_1750
Species: Streptococcus anginosus (100%)
2 2011 bp 39.13 3.65 74.59
NECEvent2014_3_4_scaffold_2059 173_002_scaffold_2059
Species: Streptococcus anginosus (100%)
3 1632 bp 34.74 3.68 98.71
NECEvent2014_3_4_scaffold_2630 173_002_scaffold_2630
Species: Streptococcus anginosus (100%)
2 1172 bp 38.99 3.71 89.85
NECEvent2014_3_4_scaffold_2682 173_002_scaffold_2682
Species: Streptococcus anginosus (100%)
2 1130 bp 38.23 3.72 88.94
NECEvent2014_3_4_scaffold_2179 173_002_scaffold_2179
Species: Streptococcus anginosus (100%)
2 1525 bp 36.52 3.74 89.90
NECEvent2014_3_4_scaffold_2091 173_002_scaffold_2091
Species: Streptococcus intermedius (66.67%)
3 1601 bp 42.54 3.75 98.75
NECEvent2014_3_4_scaffold_1555 173_002_scaffold_1555
Species: Streptococcus anginosus (100%)
3 2334 bp 36.38 3.79 78.41
NECEvent2014_3_4_scaffold_2124 173_002_scaffold_2124
Species: Streptococcus anginosus (100%)
1 1577 bp 39.06 3.80 88.65
NECEvent2014_3_4_scaffold_2298 173_002_scaffold_2298
Species: Streptococcus anginosus (100%)
1 1419 bp 37.91 3.81 94.50
NECEvent2014_3_4_scaffold_2351 173_002_scaffold_2351
Species: Streptococcus anginosus (100%)
2 1377 bp 40.16 3.81 94.34
NECEvent2014_3_4_scaffold_2559 173_002_scaffold_2559
Species: Streptococcus anginosus (100%)
2 1218 bp 38.92 3.82 98.28
NECEvent2014_3_4_scaffold_1638 173_002_scaffold_1638
Species: Streptococcus anginosus (50%)
2 2196 bp 41.48 3.83 99.18
NECEvent2014_3_4_scaffold_2145 173_002_scaffold_2145
Species: Streptococcus sp. AS20 (50%)
4 1554 bp 39.00 3.86 71.43
NECEvent2014_3_4_scaffold_907 173_002_scaffold_907
Species: Streptococcus anginosus (60%)
5 4339 bp 39.27 3.87 90.71
NECEvent2014_3_4_scaffold_2034 173_002_scaffold_2034
Genus: Streptococcus (100%)
3 1668 bp 37.59 3.87 69.78
NECEvent2014_3_4_scaffold_2638 173_002_scaffold_2638
Species: Streptococcus anginosus (100%)
1 1163 bp 39.90 3.87 99.83
NECEvent2014_3_4_scaffold_2528 173_002_scaffold_2528
Species: Streptococcus anginosus (100%)
1 1236 bp 37.30 3.88 77.43
NECEvent2014_3_4_scaffold_1940 173_002_scaffold_1940
Species: Streptococcus anginosus (100%)
1 1776 bp 37.95 3.89 100.00
NECEvent2014_3_4_scaffold_1709 173_002_scaffold_1709
Species: Streptococcus anginosus (100%)
2 2077 bp 41.94 3.90 100.10
NECEvent2014_3_4_scaffold_2345 173_002_scaffold_2345
Species: Chlamydia trachomatis (50%)
2 1382 bp 35.89 3.91 98.12
NECEvent2014_3_4_scaffold_2790 173_002_scaffold_2790
Species: Streptococcus anginosus (100%)
2 1071 bp 31.19 3.92 56.86
NECEvent2014_3_4_scaffold_2728 173_002_scaffold_2728
Species: Streptococcus anginosus (66.67%)
3 1105 bp 37.92 3.94 73.03
NECEvent2014_3_4_scaffold_2668 173_002_scaffold_2668
Species: Streptococcus anginosus (100%)
1 1140 bp 34.91 3.95 51.84
NECEvent2014_3_4_scaffold_1682 173_002_scaffold_1682
Species: Streptococcus anginosus (100%)
3 2122 bp 41.56 3.96 97.41
NECEvent2014_3_4_scaffold_1481 173_002_scaffold_1481
Species: Streptococcus anginosus (50%)
2 2461 bp 36.12 3.96 97.77
NECEvent2014_3_4_scaffold_1781 173_002_scaffold_1781
Species: Streptococcus anginosus (100%)
2 1965 bp 42.14 3.97 89.47
NECEvent2014_3_4_scaffold_1617 173_002_scaffold_1617
Species: Streptococcus anginosus (100%)
2 2231 bp 41.24 3.97 100.05
NECEvent2014_3_4_scaffold_2078 173_002_scaffold_2078
Species: Streptococcus anginosus (100%)
2 1614 bp 38.85 4.00 95.54
NECEvent2014_3_4_scaffold_740 173_002_scaffold_740
Species: Streptococcus anginosus (100%)
4 5422 bp 43.80 4.01 90.69
NECEvent2014_3_4_scaffold_1632 173_002_scaffold_1632
Species: Streptococcus anginosus (66.67%)
3 2205 bp 36.33 4.01 91.16
NECEvent2014_3_4_scaffold_1310 173_002_scaffold_1310
Species: Streptococcus anginosus (100%)
5 2800 bp 37.89 4.02 95.04
NECEvent2014_3_4_scaffold_1879 173_002_scaffold_1879
Species: Streptococcus anginosus (100%)
2 1859 bp 38.62 4.03 92.31
NECEvent2014_3_4_scaffold_1410 173_002_scaffold_1410
Species: Streptococcus mitis (50%)
2 2597 bp 30.73 4.04 98.77
NECEvent2014_3_4_scaffold_2717 173_002_scaffold_2717
Species: Streptococcus anginosus (100%)
2 1113 bp 38.72 4.04 33.42
NECEvent2014_3_4_scaffold_2487 173_002_scaffold_2487
Species: Streptococcus anginosus (100%)
2 1260 bp 38.10 4.05 87.86
NECEvent2014_3_4_scaffold_1913 173_002_scaffold_1913 5 1809 bp 42.29 4.06 99.23
NECEvent2014_3_4_scaffold_2111 173_002_scaffold_2111
Species: Streptococcus intermedius (66.67%)
3 1590 bp 35.66 4.06 81.13
NECEvent2014_3_4_scaffold_2565 173_002_scaffold_2565
Species: Streptococcus anginosus (100%)
2 1216 bp 38.16 4.07 75.00
NECEvent2014_3_4_scaffold_2449 173_002_scaffold_2449
Species: Streptococcus intermedius (100%)
1 1283 bp 40.69 4.09 65.94
NECEvent2014_3_4_scaffold_1151 173_002_scaffold_1151
Species: Streptococcus anginosus (100%)
5 3350 bp 40.90 4.12 83.37
Displaying items 1-50 of 538 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.