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NECEvent2014_3_4_scaffold_973_5

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(2013..2201)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=2 Tax=Atopobium RepID=N2BNI1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 62.0
  • Bit_score: 131
  • Evalue 3.90e-28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 62.0
  • Bit_score: 131
  • Evalue 5.40e-28
LSU ribosomal protein L28P similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 116
  • Evalue 3.60e-24

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGTCGAAGGTATGTGAAGTCTGCGGTAAGCACGCTGTTGCTGGTCGCTCTATTAGCCACTCCCACCGCACCGTCAATCGTAAATTTAAGCCAAACATTCAGTCCGTTAACGTTGTTGTTGATGGTCACCGTCAAAAGATGAACGTCTGCACCACCTGCCTCAAGTCTGGCAAAGTTGCTCGTTCATAA
PROTEIN sequence
Length: 63
MSKVCEVCGKHAVAGRSISHSHRTVNRKFKPNIQSVNVVVDGHRQKMNVCTTCLKSGKVARS*