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NECEvent2014_3_4_scaffold_1009_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..301

Top 3 Functional Annotations

Value Algorithm Source
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 200
  • Evalue 1.50e-48
apurinic endonuclease Apn1 (EC:3.1.21.2) similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 94.0
  • Bit_score: 132
  • Evalue 7.80e-29
Probable endonuclease 4 n=2 Tax=Atopobium RepID=N2BTM3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 200
  • Evalue 1.10e-48

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
CATGATGGCGGCTATGCCGTTGTACAAAATTTTGATGCAGTGCTGGATGAGTTTGATCGAGTGCTTGGCCTTTCTCGTCTTAAGGCACTGCACCTCAACGATTCTAAAAATCCCTGCGCCTCACACAAGGATCGGCATGAGAAGATAGGTGAGGGGTATTTGGGATTGCCCTTTTTTAAGCAGGTAGTAAACAACAAACGCGTGGCTCATTTGCCTATGATTTTGGAGACGCCCCAAGCATCCTTGAATGGCTATGCAGCCGAAATCGCCCTATTACGTGCAGCCGCTCAGGAGGCCTAA
PROTEIN sequence
Length: 100
HDGGYAVVQNFDAVLDEFDRVLGLSRLKALHLNDSKNPCASHKDRHEKIGEGYLGLPFFKQVVNNKRVAHLPMILETPQASLNGYAAEIALLRAAAQEA*