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NECEvent2014_3_4_scaffold_1068_5

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2863..3630

Top 3 Functional Annotations

Value Algorithm Source
MATE domain protein n=2 Tax=Atopobium RepID=U2VQ09_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 488
  • Evalue 3.90e-135
  • rbh
MATE efflux family protein {ECO:0000313|EMBL:EMZ42129.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006397 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 455
  • Evalue 6.80e-125
putative efflux protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 253.0
  • Bit_score: 264
  • Evalue 2.60e-68

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGTCCACAAATCACGACAAGCTCTTTACGCAGACGCCGCTTTATAAAATGCTACTCATTATTGTTGTCCCTGGCGCTATTAGCATGTTAACGTCGGCTCTGTACGATATTATCGACGGAATTATGGTTGGCAATCTGCTCGGAGAAACCGCTTTTGCTGCCATTAACCTGGCAATGCCTTTTGTAATAATTCTTTTCTCGATAGGTGACCTTATTGGCGTTGGCTCAGCCGTCCCCCTCTCCATTACCCTTGGCGAGAAGGACCATGAGGCTGCCAATAATATCTTCTCGTATTCCATTGTCATGCTGTTTATCAGCGGCCTAGGCATAGGACTGCTTGTATTCTTTGCAGCTCCCTTTTTAATTGCTCTACAGGGAGCAAGCGGAAAACTTGCTGAGATTTCCATCATATACCTGCGCATATATGCTTTGTTTATCCCCATCTCCGGCATGATGTTTGCAATGGACAACTACCTTAAAGTGTGCGGCAAGGTCGGACGCAGTATGGCTCTCAATATTCTTATGGCTGTATCTGGCGCCATACTAGAAGCAATTTTGCTGATTGTCTTTCATACCGAGGTATGGGGTGCTGCATTTGCTTACAGCCTCGCCATGGTTATAGCTTCTACCATTGGTTTGTGGCCCTTTATTCGTGGCAAAATGGTTTTGAAGCTCGTACGTCCAAAACCCACCTTAGCCCTTACAAAACAAATTGTTATGGCAGGACTCTCTGCCTTTCTCAACAACGTTGCTGGTCGTGTGGTAAGC
PROTEIN sequence
Length: 256
MSTNHDKLFTQTPLYKMLLIIVVPGAISMLTSALYDIIDGIMVGNLLGETAFAAINLAMPFVIILFSIGDLIGVGSAVPLSITLGEKDHEAANNIFSYSIVMLFISGLGIGLLVFFAAPFLIALQGASGKLAEISIIYLRIYALFIPISGMMFAMDNYLKVCGKVGRSMALNILMAVSGAILEAILLIVFHTEVWGAAFAYSLAMVIASTIGLWPFIRGKMVLKLVRPKPTLALTKQIVMAGLSAFLNNVAGRVVS