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NECEvent2014_3_4_scaffold_1708_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1..1884)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 628.0
  • Bit_score: 1226
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 628.0
  • Bit_score: 1007
  • Evalue 2.30e-291
DNA-directed RNA polymerase subunit beta n=2 Tax=Atopobium RepID=N2C0W1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 628.0
  • Bit_score: 1227
  • Evalue 0.0
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
GTGCCTACCACAAAGATTTCCACTACTACCTCCGCAAATGCACGTGAGCGCGTGAGCTTTAGCAAAATTCGCTCTAACGTCGAGCCACCCAACCTCATTGAAGTTCAGAAGGAGTCGTTCCGTCGTTTTATGACGACCGGTTTGGACGAAGCCTTCGCAGAGGCATCTCCTATCGAGAATGCCGCTGGAACTATGGAGGTTTCGTTTGGCGAGCATCAGTTTGGAGATCCTGCGCACACCATAGCAGAATGCCGTGCAAAGGATATTTCTTATCAGGCTCCCATGCTTGTAGAGGTTCGCTTCGTCAACAAAGAGACAGGCGAAATTAAGGAGCAGCTCGTATTCATGGGTGATTTCCCACTCATGACCGAGCGTGGTACGTTTATTATCAATGGCTCTGAGCGCGTTGTTGTTTCTCAGCTTGTCCGTTCCCCAGGTGTGTATTTCTCTGAGGAGACGGATAGCGGTGTGCTGGTACACCGTGCCCAGTTTATCCCCGCCCGCGGTGCATGGCTGGAGTTTGAGGTCGATAAACGCGGTCAGCTTGTGGTATCTATCGATCGCAAGCGTCGTCAATCTGCAGCCTTGTTACTGCGCGCCCTGGGCATTGCAGAGTCCGATGATGACATTCTCAACCTGCTGGGTGATTCTGACGTAGTCCGCTCCACCATCGAGCGCGATTCCGTACAGACCCGCCAGGCTGCGCTAGAAGAGATTTATCGTCGTCAGCGTCCCGGCGAGCCCGTTACGGCAGATTCTGCTCGCTCGCTGCTTGATGGCCTGTTCTTTAACCCCATGCGCTATGACCTTGCTAAGGTCGGCCGCTACAAGATCAATAAAAAGCTGACGCTTGACACAGAGGCAGATGTCACCACGCTTACCGAGGAGGACATCGTCGTTGCTCTGCGTTATTTGCTTGCGTTGCATGCTGGCGATACTACCAAGAAGGTTGACGACATTGACCACTTTGGTAACCGTCGTGTACGCACGGTAGGCGAGCTGGTACAAAACCAGTTCCGTATCGGCATGAGCCGTATGGAGCGCGTCATTCGTGAGCGCATGGCTTCTCAGGATGCGGACGACATCACACCGCAATCCCTTATCAACATCCGTCCTATTGTGGCAGCAATCAAGGAGTTCTATGGCTCTTCTCAGCTGTCCCAATTTATGGACCAATCCAATCCGCTTGCTGGTCTTACCAATAAGCGTCGTCTTTCTGCGTTGGGACCTGGCGGTCTTGCGGGCCACAAGTCCGGCTCCAGCCGTCGTACCAATGTTCCTACGGCAGTGCGTGACGTTCACAACTCTCACTATGCTCGTATGTGTCCTATCGAGACCCCCGAAGGACCAAACATTGGTCTTATCGGCTCGTTGGCACTGTACGCCCATGTAAACGAGTACGGCTTTATTGAGTCTCCGTATCGTCGTGTTGTGGATGGCACCCTTACGGACGAGGTCGTATGGATGACAGCAGATGAGGAGGAGCAGCACAACATTGCTCCTGCTAACACCCCTGTTGATCCCAAGACGGGCGAGTTTATTGAGCTCGATCCTCTTACCGGCAAGCTTGCCAAGCCCACCCGCGTGGTTGCTCGTACCCGTGACTTTGACGGTTCCTTTGGTGCACCTGCACAGGTGCCCGTAGAGGACATTGACTTCATGGACGTTTCTGCCCGTCAGCTTTTGTCGGTAGCAGCAACGCTCATTCCCTTCCTTGAGCACGATGACGCTAAGCGTACCCTCATGGGTGCAAACATGCAGCGTCAGGCCGTGCCCCTGATCAGGGCATCCGCGCCTTTGGTAGGTACGGGCATGGAGGCTCGTGCGGCGCTTGATTCTGGCGAGATGATCTGCGCTGTTGAGGACGGTCGTGTTGTAGAGGTA
PROTEIN sequence
Length: 628
VPTTKISTTTSANARERVSFSKIRSNVEPPNLIEVQKESFRRFMTTGLDEAFAEASPIENAAGTMEVSFGEHQFGDPAHTIAECRAKDISYQAPMLVEVRFVNKETGEIKEQLVFMGDFPLMTERGTFIINGSERVVVSQLVRSPGVYFSEETDSGVLVHRAQFIPARGAWLEFEVDKRGQLVVSIDRKRRQSAALLLRALGIAESDDDILNLLGDSDVVRSTIERDSVQTRQAALEEIYRRQRPGEPVTADSARSLLDGLFFNPMRYDLAKVGRYKINKKLTLDTEADVTTLTEEDIVVALRYLLALHAGDTTKKVDDIDHFGNRRVRTVGELVQNQFRIGMSRMERVIRERMASQDADDITPQSLINIRPIVAAIKEFYGSSQLSQFMDQSNPLAGLTNKRRLSALGPGGLAGHKSGSSRRTNVPTAVRDVHNSHYARMCPIETPEGPNIGLIGSLALYAHVNEYGFIESPYRRVVDGTLTDEVVWMTADEEEQHNIAPANTPVDPKTGEFIELDPLTGKLAKPTRVVARTRDFDGSFGAPAQVPVEDIDFMDVSARQLLSVAATLIPFLEHDDAKRTLMGANMQRQAVPLIRASAPLVGTGMEARAALDSGEMICAVEDGRVVEV