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NECEvent2014_3_4_scaffold_1722_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1555..2055)

Top 3 Functional Annotations

Value Algorithm Source
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4) similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 166.0
  • Bit_score: 260
  • Evalue 3.20e-67
L-ribulose-5-phosphate 4-epimerase n=2 Tax=Atopobium RepID=N2BPW7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 356
  • Evalue 1.50e-95
  • rbh
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EMZ42311.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 356
  • Evalue 2.10e-95

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
CTCAATCCCTCATCTGACACAGCAACACATGCCTATTTGTATCGTGCGTGGGATGCGGTTGGCGGAATCGTTCATACGCATTCTGCATCCGCAACCTCTTGGGCACAGGCTGGTCGGTCTATTCCTTGCTATGGCACCACACAGGCTGATTATTTCTACGGCGAGATACCTTGTATGCGGGGGCTTACGCAAGAAGAGATAGAAGAAGCCTACGAGTACAACACCGGCAAGGTAATCGTCGAGGGTTTTGAAGGATGCGATCCTCTTGCGCAACCCGGTTGTTTAGTGCGCAATCACGGGCCCTTCTCGTGGGGTAAGGATGCTGCAGCCGCGGTGTACCATGCCGTGGTTGTGGAAGAAGTGGCAAAGATGTCTCTTAATACGGAGCTACTTTGTGGGTCTATAGGTCGGCCTTGTGCAAAAGCCCAAGCTCCTCAATATTTGCTCGATAAGCACTACCAGCGCAAACATGGGCCCCATGCGTATTATGGACAAAACTAG
PROTEIN sequence
Length: 167
LNPSSDTATHAYLYRAWDAVGGIVHTHSASATSWAQAGRSIPCYGTTQADYFYGEIPCMRGLTQEEIEEAYEYNTGKVIVEGFEGCDPLAQPGCLVRNHGPFSWGKDAAAAVYHAVVVEEVAKMSLNTELLCGSIGRPCAKAQAPQYLLDKHYQRKHGPHAYYGQN*