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NECEvent2014_3_4_scaffold_1952_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..1204

Top 3 Functional Annotations

Value Algorithm Source
pyruvate formate-lyase (EC:2.3.1.54) similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 408.0
  • Bit_score: 566
  • Evalue 5.00e-159
Pyruvate formate-lyase n=2 Tax=Atopobium RepID=N2BYX9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 400.0
  • Bit_score: 806
  • Evalue 1.00e-230
Pyruvate formate-lyase {ECO:0000313|EMBL:EMZ42139.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 400.0
  • Bit_score: 806
  • Evalue 1.40e-230

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
CGCGTGTTTTCTGGTACACCTGAGTCGCTGTATCACAAGGCTGGAGAGGTTATTCGTTTGGGTGATGGTATTCCTCAGTGCTTCAACGATGAGGTAAACATTCCAGCATTTGTTAACCGTGGTGTGAGTCTTGAGGATGCCCGCGATTACGCTGTTGTGGGCTGCGTGGAGCTGTCCATCCCGGGTCGCATGTACGGTTTGCATGACATCTCTATGTTCAATATGGTGCGCTGTCTGGAGATTGCCATGCAGGCCCGTCCTGAGGGATACCGCAGCTTCCAAGAGCTTCTCGATGCGGTGGACGCTGTTATCGATAGCTATGTTGCCCTTATGGCGGAAGGCTGCAATGCGTGCGATGTGGCTCATCAAAAAACCAGTCCCACGCCCTTGCTCAGTGCGCTGGTAGCGGATTGCATGACAAATGGCAAGGATATTACCGCAGGTGGAGCGCGGTATAATCCCTCTGGCGTGCAAGGCGTAGGCACCGCAAACCTGGCCGATTCCCTCATTGCAATTAAGTACGCCGTATTTGAAGAGAAGCTCCTGAGCTGGCAAGAGCTGGTGGGTCTGCTTGAGCGCAACTGGGCAGGAGAGGGGGATGAGGTATGGCGTCAGCGCCTGATTAACGCCTATCCCAAGTACGGCAATGATATTGATGAAGTGGATATGCTGGGTCGTCATTTCTTGGAGCACTATGGACATGAGGTGGAAAAGTACACCAATCCTCGTGGCGGCCATTTTCAGCCGGGTAGCTATACCGTGTCTGCTCATATTCCGCTTGGCGAGAAGTGCGGTGCCACGCCCGATGGTCGTTTTGCACATGAGCAGCTGGCAGATGGTGGCCTGAGTCCTATGGCAGGTCGTGATACTAACGGACCTACCGCAAGCCTCAAGAGCGTGTCCAAGCTCAAGAATGTTTTGGATTCCAACGGTAGCTTGCTCAATGTAAAATTCTCGCCAGCAGCCTTGGCGGGCGAGAGTGGGCTGACTAAGCTTGAGGCATTTCTCAAGGCTTTTTCTCGTTTGGGAATTCAACATGTGCAGTTTAATGTGGTCGATAAGAAAACACTGCTTGATGCTCAAATCCATCCAGAGAATCACAAGGATTTGATTGTGCGCGTGGCGGGGTATTCTGCCATGTTTGTTGAGCTGTCAAAGGCTGTTCAAGATGACATCATTAGCAGGACCGAGCATGTCCTCTAG
PROTEIN sequence
Length: 401
RVFSGTPESLYHKAGEVIRLGDGIPQCFNDEVNIPAFVNRGVSLEDARDYAVVGCVELSIPGRMYGLHDISMFNMVRCLEIAMQARPEGYRSFQELLDAVDAVIDSYVALMAEGCNACDVAHQKTSPTPLLSALVADCMTNGKDITAGGARYNPSGVQGVGTANLADSLIAIKYAVFEEKLLSWQELVGLLERNWAGEGDEVWRQRLINAYPKYGNDIDEVDMLGRHFLEHYGHEVEKYTNPRGGHFQPGSYTVSAHIPLGEKCGATPDGRFAHEQLADGGLSPMAGRDTNGPTASLKSVSKLKNVLDSNGSLLNVKFSPAALAGESGLTKLEAFLKAFSRLGIQHVQFNVVDKKTLLDAQIHPENHKDLIVRVAGYSAMFVELSKAVQDDIISRTEHVL*