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NECEvent2014_3_4_scaffold_1976_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1..309)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=2 Tax=Atopobium RepID=N2BIR1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 4.10e-51
MATE efflux family protein {ECO:0000313|EMBL:EMZ41652.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006397 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 208
  • Evalue 5.80e-51
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 99.0
  • Bit_score: 79
  • Evalue 4.80e-13

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGCACAGGCTGTTGAGAATAACGAGCATCACGTATCGGAAGAAGCGCAAGTAGAAACGCTTGACGTAACGTCGGGCGTTATCTGGAAGCAGCTCCTACAACTGTATATCCCCATCTTCCTGAGCGCCTTTATGCAGCAGCTTTACACCCTTATGAACACGTGGATTGTGGGGCAGTTTGCTGGCAAAGCTGCTGTTGGCGGCATACAGGTAACCCAAGCACTCACCGATTTAGCCGTTGGTTTTGCTGTGGGTGTTGGTGCTGGCTGTGCCGTTATTGTAGGTCAGTATTTTGGTGCTCATGACGAT
PROTEIN sequence
Length: 103
MAQAVENNEHHVSEEAQVETLDVTSGVIWKQLLQLYIPIFLSAFMQQLYTLMNTWIVGQFAGKAAVGGIQVTQALTDLAVGFAVGVGAGCAVIVGQYFGAHDD