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NECEvent2014_3_4_scaffold_2152_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(478..1239)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BMW5_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 490
  • Evalue 1.30e-135
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41531.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 490
  • Evalue 1.90e-135
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 251.0
  • Bit_score: 269
  • Evalue 1.00e-69

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGAAAGCCCGAATTTTGTTGGTAGAAGATGACCGAGATATTGTGCGTACGCTTTCTGAACTCTTGATAAGCGAGGGCGCACAGGTAGTGTGCTGTGACACGCAAGACGCGGCCATTGCCTACGCCACCGGCGCACAGCCTGGTAGTGAGATACAGCGTGGCAATAGGATGCAGCTTACGACTGCTCACGAGAAACCCACGGCTGCGGCATTTGATATTGTTCTTATGGATATTAGTCTGACGCAAGGCAACGGTTTTGCCGCCTGCTCAGCCATCAAAGCTGCTCAGCCCAATCTGCCCGTGGTCTTTTTGACGGCATCAGGTGATGAATTTAACACCGTAACGGGACTGTCCATGGGAGCCGATGACTACATTGCCAAGCCGTTTAGGTCTCGCGAGCTTCTGGCGCGTATTGCTGCAATTTTGCGCCGACAGCGCCCCGCAGCAGAATCCTTACTTAAAACGGGTGACGTGATCATTGATACAGCCCGAGCCCGTGTAAGCAAGGCCGGTGCAGAAATTGATCTTTCCGCTATTGAGTATCGCCTACTGCTTGTACTTGCTGCGCATCCCGGAACCCTCATAACACGCGATGCCTTGCGAGAAGCGCTTTGGGATGATGCGGGTGCCTACGTAGGAGACAACACCATTTCTGTATATATAAAGCGCTTGCGCCAAAAGTTGGAAGACGACCCAGTAGAGCCTCGCATTATTCTAACGGTGCGCGGGCGTGGCTATAAGGCGGCTGAAGCATGGAACTAA
PROTEIN sequence
Length: 254
MKARILLVEDDRDIVRTLSELLISEGAQVVCCDTQDAAIAYATGAQPGSEIQRGNRMQLTTAHEKPTAAAFDIVLMDISLTQGNGFAACSAIKAAQPNLPVVFLTASGDEFNTVTGLSMGADDYIAKPFRSRELLARIAAILRRQRPAAESLLKTGDVIIDTARARVSKAGAEIDLSAIEYRLLLVLAAHPGTLITRDALREALWDDAGAYVGDNTISVYIKRLRQKLEDDPVEPRIILTVRGRGYKAAEAWN*