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NECEvent2014_3_4_scaffold_2158_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1234..1539)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=997872 species="Bacteria; Actinobacteria; Corio similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 3.80e-47
Ribonuclease Y n=2 Tax=Atopobium RepID=N2BTJ4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 2.70e-47
RNA binding metal dependent phosphohydrolase similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 101.0
  • Bit_score: 186
  • Evalue 2.70e-45

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTCCAAGCTGCGGACGCCATCTCTGCGGCGCGTCCGGGTGCTCGTCGTGAATCTGCAGAGAACTACATTAAGCGTCTAGAGAAGCTTGAGACTATCTCCAACGCACATGAAGGCGTTGAGCGCACCTATGCTATGCAGGCCGGTCGTGAGCTACATGTCATGGTAGAGCCTCAGAAGATTTCTGACTCTGAAGCCACCATTTTGGCTCATGATATCGCTCAGCAAATTGAGGATGAGATGGAATATCCTGGCCAGGTTCGTGTGGTTGTCATTCGTGAGTCTCGCGCCGTGGACATTGCTAAGTAG
PROTEIN sequence
Length: 102
VQAADAISAARPGARRESAENYIKRLEKLETISNAHEGVERTYAMQAGRELHVMVEPQKISDSEATILAHDIAQQIEDEMEYPGQVRVVVIRESRAVDIAK*