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NECEvent2014_3_4_scaffold_859_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2251..3516

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 421.0
  • Bit_score: 812
  • Evalue 2.80e-232
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Atopobium RepID=N2BJH9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 421.0
  • Bit_score: 812
  • Evalue 2.00e-232
  • rbh
GTPase EngC similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 421.0
  • Bit_score: 399
  • Evalue 8.60e-109

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGGCACAAAAAAACAAACATAGTCGCAATCGCAAGAGTGCCGGTAAGAATCAAGTTGTTCTACCGGCGCTTTCTTCATTATTGGATGTGCCGAGCTTTGATGCGCTCCCGCTTTCCGAGGCTCAGCGTGCTGCCTTTTTACATACCTCTGCCCAGCTTGCTGCCGAGAATGGCGTTAATCGTGCAGAATATCATCTGGGCTGTGTGGTAAGGCTTGACCGCGGTTTTCCGGCGCTTGCCTGTGCCGATAGTGTTTTTAGGGCAGAGTATTCCGTTGCACTATCTCGCAGCGCACGGGTTCAGGCGGCAGTTGGTGATTGGGTGGTCGTACGCCGTCCTCAAACGCATGACATGGGCGTGATTGAGGCAATTTTGCCACGTGTGAGTGATGTTGCTCGCTGGCGTGGCAACAGTCGAGGAGAGCATCAAACACTTGCAGCTAACGTTGGTCTGGTTCTTATCGCTCAAGCACTTTCTGAGCATTCTTTGAATTGTAATCGCATTGCTCGCTCTATGGTTATTGCCCTTGATTGCGGTGCGCGTGTTGCCGTGGTGCTTACGAAGGCGGATCGCTGTGGTGATTCGGCGCAGCTGGTAGAGCAGCTACGCATACTGACGCGTGTAGTTGGTGCGGATGTTCCCATTGTGGTTACCAGTGCGGGTGCGGATGAGGGTGCTCGCAGAGGTGAGGATTCCGGTATAGGCGTAAGTGAGGGCGCTGACGCGGGTGTAAGTGCCGGTGTGGTTGCTAATGCGGATGCTGATATGGTTGTAAGCATAGGTGCCGCTTCTGACCAGATTAGCTGGGGGATTGATGCGGTTAGGGCACTTGTTGCTCCTCGCACCACAGCAATTGTGTTGGGAGAATCTGGCGCAGGTAAATCTACTTTGCTCAATGCACTTCTCGGCAGAAAAATTCTTGAAACTGGTGCTGTGCGCAGCTCAGATGATGCAGGTCGTCATACCACGGTTACACGTCGTATGGTGCAAATTCCTCATGCGGGCATTATTGTGGATGCTCCTGGTTTACGTAGTCTTCCCTTAGTGGGACACGAGCGCGGTTTGGCACTGGCATTTCCGGAGATTGCTTCTGCAGCTCAAGGCTGCAAATTTAGAGACTGTACACCCACGCATGAGCCTGGATGTGAAGTGTTGGCTCATGCAGCTGCGGGTGATTATTATCCAGAGCGTCTTGCCGCATACCTTGCTTTAGCTGCAGAGATGCGTTCATCTAAGCAAACGCTCGATCCAGATATTATTGTATAG
PROTEIN sequence
Length: 422
MAQKNKHSRNRKSAGKNQVVLPALSSLLDVPSFDALPLSEAQRAAFLHTSAQLAAENGVNRAEYHLGCVVRLDRGFPALACADSVFRAEYSVALSRSARVQAAVGDWVVVRRPQTHDMGVIEAILPRVSDVARWRGNSRGEHQTLAANVGLVLIAQALSEHSLNCNRIARSMVIALDCGARVAVVLTKADRCGDSAQLVEQLRILTRVVGADVPIVVTSAGADEGARRGEDSGIGVSEGADAGVSAGVVANADADMVVSIGAASDQISWGIDAVRALVAPRTTAIVLGESGAGKSTLLNALLGRKILETGAVRSSDDAGRHTTVTRRMVQIPHAGIIVDAPGLRSLPLVGHERGLALAFPEIASAAQGCKFRDCTPTHEPGCEVLAHAAAGDYYPERLAAYLALAAEMRSSKQTLDPDIIV*