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NECEvent2014_3_4_scaffold_2299_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(297..1046)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=2 Tax=Atopobium RepID=N2BNQ7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 496
  • Evalue 1.80e-137
  • rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=997872 species="Bacteria; Actinobacteria; Cor similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 496
  • Evalue 2.60e-137
DNA repair protein RecO similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 249.0
  • Bit_score: 272
  • Evalue 1.60e-70

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCCTCAGCGTCGGACCTTTCGCACAAAAGGAATTGTGCTTCGCAAAACAAAATTAGGTGAACAAGACGTCATTCTCACCCTTTTAACTGAGGATGGCTCGCAATGTCAGGCAGTGGCTAAAGGAGCTCGCAAACCAGGGAGTCGTTTGGCTGCGCGCTGCGACCTGTTTTGTGAGGTCGATTTTTTGCTGGCGCATGGTCGGTCGTTGGCGGTGGTGGCGGAGGCTTCTTTGATAACGCCGCACCAGCTATTGCGTATGCAGGTGGAGCATATGAGTGCTGCTGTCTGTGTGTGTGAGATTGCACAACATACCTCGTTTGAAGATGCTCAGGATGGGTTTTTGTTCCCCTTGCTGTCACGCGTGCTCTTGGCAATTGAGCAGGCAACTGTCAGCGAGCAGCTCGATCTGATTGTGGCTGCCTATACGTTTAAGGTGTTTGCTCATCAAGGATGGCGGGTGCAATTGGATAGTTGCGTTGCCTGTGCAGATCCAGCACCTTCGCGTTTCTCGGCAGCTATGGGTGGCGTTGTGTGTGAAAGTTGTGCGGCAGCTTTAGAGGGTGCAGAGCCCATTTCCCACACAGAAATCGAATGGCTTGATGCTCTGTTGCATATGACCTTTGATCAGATACTTGCAGCTCAGGTTGATAAACAAACAGCGGCCTATATAGCTTCTTTGGCACATATTTGGGCGGTCACGCACCTGGATTGTCGGCTGCGTGCCTTTGAATATTATCTGTCAGTGTAG
PROTEIN sequence
Length: 250
MPQRRTFRTKGIVLRKTKLGEQDVILTLLTEDGSQCQAVAKGARKPGSRLAARCDLFCEVDFLLAHGRSLAVVAEASLITPHQLLRMQVEHMSAAVCVCEIAQHTSFEDAQDGFLFPLLSRVLLAIEQATVSEQLDLIVAAYTFKVFAHQGWRVQLDSCVACADPAPSRFSAAMGGVVCESCAAALEGAEPISHTEIEWLDALLHMTFDQILAAQVDKQTAAYIASLAHIWAVTHLDCRLRAFEYYLSV*