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NECEvent2014_3_4_scaffold_2583_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 439..1098

Top 3 Functional Annotations

Value Algorithm Source
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=2 Tax=Atopobium RepID=N2BUI9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 416
  • Evalue 1.60e-113
  • rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EMZ42228.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 219.0
  • Bit_score: 415
  • Evalue 5.10e-113
amino acid ABC transporter similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 219.0
  • Bit_score: 333
  • Evalue 3.90e-89

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
TTGAGTTTTTCGGAGCTTATTTCTCTATATGGCACCATGTATATCCAGGCCTTGTTAACCACTTGGTCAATGACGTTGGTTTCGTTTGCCTGTGTCATGGTTGTGTCCATAGTTATTACCGTGCTGCGCGTAAGTCCCATTGCACCCTTGCGCAAAGTAGGGGATTTTTATGTGCAAATCTTCCGTAACATTCCAGGCATTTCTTTGCTGGTTATCTGTGTGTATGCGCTGCCGAATCTCAAGGTAGTGCTCGATTATCGTGAGTGCGTGATCGTAACCACGGTACTTATCGCCTCTGCCTTTGGATCTGCAAACTTTATGAGTGGCATCAATACCATAGGTGTGGGCCAAATTGAGGCGGCACGTTCTTTGGGTTTATCCTTCATGCAGATGCTGCGACTTGTTGTAATTCCTCAGGCCTTGCGTTCAGCCATTTTGCCCATGACCAATCTGTTTATTGCGGTCATGCTTACCACGGCTTTGGGCTCGCAAGTTCCCTTGTCGCCCAATGAGCTTACGGGTTTGGTTTCCTTTATCAACACACGCTCTGTGGGCGGTATTATGCCCTTTATGGTCTCCGCTTTAGCCTATGCACTTACGGCATTTGTCATTGGTTTTGCTGGCGATAAGCTCGATAAGAAAGTGAGGATCAAGCGATGA
PROTEIN sequence
Length: 220
LSFSELISLYGTMYIQALLTTWSMTLVSFACVMVVSIVITVLRVSPIAPLRKVGDFYVQIFRNIPGISLLVICVYALPNLKVVLDYRECVIVTTVLIASAFGSANFMSGINTIGVGQIEAARSLGLSFMQMLRLVVIPQALRSAILPMTNLFIAVMLTTALGSQVPLSPNELTGLVSFINTRSVGGIMPFMVSALAYALTAFVIGFAGDKLDKKVRIKR*