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NECEvent2014_3_4_scaffold_2699_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..329)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=2 Tax=Atopobium RepID=N2BW70_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 210
  • Evalue 6.70e-52
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 210
  • Evalue 9.50e-52
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 112.0
  • Bit_score: 175
  • Evalue 8.90e-42

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGCAAAGCACGGTAAGAATTATCGCAACGCTTCTCAGAAGGTCTCTTCAGACCTCTACAGCCCCAAGGCTGCTCTTGAGCTCGTAAAGGAGCTTGCAAGTGCTAAATTCGATGAGACCATCGACGTTTCTATCCGTTTGGGCGTAGACACCCGTAAGGCAGATCAGAACGTTCGTGGCTCCATCTCCCTTCCTAACGGCACCGGCAAGACCGTTCGTGTTGCAGTATTTGCAGAGGGCGAGAAGGCCCGTGAGGCAGAGGCTGCTGGTGCAGACATCGTAGGCGCAGATGATCTGGTTGCTTCCATCCAGGCTGGCAACTTTGAT
PROTEIN sequence
Length: 109
MAKHGKNYRNASQKVSSDLYSPKAALELVKELASAKFDETIDVSIRLGVDTRKADQNVRGSISLPNGTGKTVRVAVFAEGEKAREAEAAGADIVGADDLVASIQAGNFD