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NECEvent2014_3_4_scaffold_2765_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(772..1089)

Top 3 Functional Annotations

Value Algorithm Source
Basic amino acid/polyamine antiporter (APA) family transporter n=2 Tax=Atopobium RepID=N2BXT6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 8.60e-52
Basic amino acid/polyamine antiporter (APA) family transporter {ECO:0000313|EMBL:EMZ41754.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 1.20e-51
amino acid permease-associated protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 103.0
  • Bit_score: 109
  • Evalue 4.40e-22

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ACCTTGTATTTTGCAAAGATTGCATGGCAAAACAAATACATGGGGGATGACGGTGCTGGCAGCGGAGCACAAGCTCGCTTCTTTGGTACCTTGGGCTGCGTATACGCGCTCTTTTTGGTGTGGTCTTGCGGTGTGACGGGCATTATGATTACCACCATTTTGTTTACGCCAGGCATATTGCTCTATGCTTGGGGAGAAAAGACACAAGACAAGAAGATTTTGCCTACCATGGCGGATAAGATTATTGCCTTGATTATTGTGGGTACCATGTTGGTTTCTGTGTATCAGATTGCAACAGGAGCTATTTCTGTAATCTAG
PROTEIN sequence
Length: 106
TLYFAKIAWQNKYMGDDGAGSGAQARFFGTLGCVYALFLVWSCGVTGIMITTILFTPGILLYAWGEKTQDKKILPTMADKIIALIIVGTMLVSVYQIATGAISVI*