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NECEvent2014_3_4_scaffold_2797_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..244

Top 3 Functional Annotations

Value Algorithm Source
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VED0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 166
  • Evalue 8.30e-39
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EMZ42479.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 166
  • Evalue 1.20e-38
SUA5/yciO/yrdC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 77.0
  • Bit_score: 69
  • Evalue 6.60e-10

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 243
TGTGGTACCCCGCTTATTGTAAGTAGTGCCAACCGCCACCTGCATGAAGTTCCAAAGTACTTCTCGCAAGTTGACCCTCGCATGATTGAGGCTGCAGATATTGCTTTTAATGGTGTTCCCAATTTATGCCATGGGCCAAGTACTATTATCGATTGCACCGAGGGAGAAACTCGTGTGCTGCGTCGTGGTGCCGTGCCACTTTCTCAAATCGAGAAGGTCTTGGGGCATCGCATTCTGTCCTAA
PROTEIN sequence
Length: 81
CGTPLIVSSANRHLHEVPKYFSQVDPRMIEAADIAFNGVPNLCHGPSTIIDCTEGETRVLRRGAVPLSQIEKVLGHRILS*