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NECEvent2014_3_4_scaffold_1222_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 1972..3060

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase n=2 Tax=Atopobium RepID=N2BYM9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 363.0
  • Bit_score: 728
  • Evalue 3.20e-207
  • rbh
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EMZ42009.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 363.0
  • Bit_score: 728
  • Evalue 4.50e-207
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 342.0
  • Bit_score: 370
  • Evalue 6.30e-100

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGGCAGATCAAACACACGCTTCTGCACACAACAATCCACAAAACCCGGCGACCCTCATCCCCTCTACGCCATATGGACTTGTTGGTCGCACGCTTGCGCACAGCTGGTCTTCCAAAATCCATGCGCAGCTGGGTAGCGCCCCCTATGCACACTATGAGCTTGAGCCGGAACAACTCGAGACATTCATCCATGCTGACGGCTGGCAGGGACTTAATGTAACCATCCCCTACAAGCGTGCCGCCGCTCAGCTGGCCGACGAACACTCTCAAGCGGTACAGGAGCTGGGTGCTGCTAACACGCTGGTGCGTCTTTCTAACAATACCATCTATGCCGAGAATACCGATGTGCTCGGTTTTTCTTGGATGCTTGAACGGTTTTGCACAACCCAGCTTGCCGGTAATGCTACCGACGTGCTTACCAACAAAAAGGTGCTTGTGTTGGGTAGCGGTGGTGCTTCACGCGCCATTTGCTATGTACTTAAGCAGGTACAAGCACAGCCCGTTGTGGTTTCTCGCACGGGCACGACCACCTACACCAACCTGCTGCCACAGCATCAGGATGCCACGCTCATTGTTAATACCACGCCGGTAGGTATGTATCCTCACGACTCCACCTCACCTGTATCTCAACAGACGCTTCAAGCGTTTTCACAGCTCAAAGGCGTATTAGATATTGTGTACAATCCAATACGCACGCGTCTTTGTCAACAGGCACACCAGCTAGCAATCCCTGCTCAAACCGGTTTATCCATGCTCGTTGCTCAGGCCTGGGCCTCCTCTAAACTTTGGCAGCAGCGCGCTCTTCCTGAAGAGTATATTGAGGCCATCGAGAAGGACCTCCAACGTCAGATTTTAAACATTACCTTTATCGGCATGCCTGGCTCTGGCAAGTCTTCTACCGGTAGAAAGCTTGCGCATATGCTTCAGCGTCCCTTTGTTGATCTTGACGATGCAACAGCTCTTGCGTGTGGTATGTCGCCAGCACGCTATATCACGCAGTATGGTGAGGCCGCTTTTAGAGACATAGAGACGCAGGTATTGGCACAGTACAGCCATGAATCTGGACTTATCATCTCTTGTGGCGGTGGG
PROTEIN sequence
Length: 363
MADQTHASAHNNPQNPATLIPSTPYGLVGRTLAHSWSSKIHAQLGSAPYAHYELEPEQLETFIHADGWQGLNVTIPYKRAAAQLADEHSQAVQELGAANTLVRLSNNTIYAENTDVLGFSWMLERFCTTQLAGNATDVLTNKKVLVLGSGGASRAICYVLKQVQAQPVVVSRTGTTTYTNLLPQHQDATLIVNTTPVGMYPHDSTSPVSQQTLQAFSQLKGVLDIVYNPIRTRLCQQAHQLAIPAQTGLSMLVAQAWASSKLWQQRALPEEYIEAIEKDLQRQILNITFIGMPGSGKSSTGRKLAHMLQRPFVDLDDATALACGMSPARYITQYGEAAFRDIETQVLAQYSHESGLIISCGGG