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NECEvent2014_3_4_scaffold_1268_2

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 1135..1830

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase, family 4 n=2 Tax=Atopobium RepID=N2BUJ9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 485
  • Evalue 3.90e-134
  • rbh
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EMZ40544.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 485
  • Evalue 5.50e-134
phage SPO1 DNA polymerase-related protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 202.0
  • Bit_score: 314
  • Evalue 2.60e-83

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCTCGTGTGCGAAAGGAGCGCCCATCGCTAGCGGACGCTGAAGGGACTATATACACCATGGAGATTCCGGGACATCCACATCCAAAACCCGGTGAGGTTTCACTGGATGAGCTTGCGGCTCTTATGCAGGATTGTCGTAAGTGTACCTTGTGTGACACGCGTACCACCATTGTGTTTGGTGATGGCAATCCGCATGCGCGGGTGATGTTTATTGGTGAGGCTCCCGGCCGTAATGAGGATTTGGGAGGCAAGCCATTTATTGGTGCTGCAGGTCATAAGCTGGATGCCCTCTTAAGCTGTGCAGGTTTAATGCGAGAAGAGATTTTTATCGCCAACGTACTCAAATGCCGCCCGCCCGCAAATCGCAATCCGCGCTACGATGAAATTCAAGCCTGTTCACCCTACTTACGTGAGCAAGTGCGCTCTATTTGGCCCGATGTGATTGTTTGTTTGGGTAACTTTGCTTCGCAATGGGTACTAAAAACAGAGCAGGGCGTAACCAGTTTGCGTGGACAGCTGTATCAACAAGGACACTTTGTTGTCTGTCCAACCTTTCATCCGGCGGCGACCATCTATCACAGGGAGTGGCAGCCACTTTTGGAGGAAGACCTGCGTCTTGTGGGTGCGTGGCTTACGCAAAATCCTCGTTCGGGCAGTGCTCAAGCTGATCGAACACAACTCCCTAAGGAGTAG
PROTEIN sequence
Length: 232
MARVRKERPSLADAEGTIYTMEIPGHPHPKPGEVSLDELAALMQDCRKCTLCDTRTTIVFGDGNPHARVMFIGEAPGRNEDLGGKPFIGAAGHKLDALLSCAGLMREEIFIANVLKCRPPANRNPRYDEIQACSPYLREQVRSIWPDVIVCLGNFASQWVLKTEQGVTSLRGQLYQQGHFVVCPTFHPAATIYHREWQPLLEEDLRLVGAWLTQNPRSGSAQADRTQLPKE*