ggKbase home page

NECEvent2014_3_4_scaffold_1318_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2..1318

Top 3 Functional Annotations

Value Algorithm Source
LPXTG-domain-containing protein cell wall anchor domain n=2 Tax=Atopobium RepID=N2BJA8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 868
  • Evalue 2.40e-249
  • rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EMZ41847.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 868
  • Evalue 3.40e-249

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
GATACCTCTCCTTTGCAAGATGCTCTTACCGAGCATAAAAGCCAGTATGAGGCTGCTAAGGCATACGGTATGAAGATTTCTGAGGAAAGCTCGAAGGCTTTTGAGGCTGAGGTGGCCGCCTGCGATGCCCTGCTCAAAAAGGCTCAGGATGGCCCCTCTTCCGTTACACAAGACGAAATTACTGCTCAGCGCCAAAAACTGAACGAAGCGTTTGGTGCACTCAAGCCACTACCCTATGATAGAGTTGCCCTCAAAGCTGCTCTTGACAAGGCACAAAAAGCACTTAATCGCATTCCGGAGCTTGCCAAGGACGGTATGGGTTTTGAGAAGAGCGGCTTTGATGCCTTTTATCGTTCCTATCTTGCAGCAAAGGATTTGGACGCCCTCGAAGACCTTGCCTTTATCATTGGTCCCCATGAGGGAGGCCCCCTTAAGACCCAGCGCGACTTTGATACGACTGCAGATGAACTCAATCGTCTTACCCAGGCTCTTAATCCAATCAAAATGGATCTTGCCAAAACCGATAGTCTTCGCGAGACCTACTTCAATGCCCTTGATGTGATGCCGCAGGAAGGCTTTGGGTGGACACCTGCTTCCCGCACTGCTTTTTACGAAGCACTCGAACATGCAAAGATCATGTTGAACACCCTGTATCCCGAGCAACGCGATGTAGACAGCGCGCTTTCCCAACTTCAAACAGCCACAAAGGCTCTCGAAGAGACAAAGCTGGATACCACAAAGCCAAAATATAAGCCATTTACCTTAGGTATTCGCTATCGTCATCACAACGATTCAGCTCCTTCGGCTTTGATCGATGAGTACTTTGAGGCAGACGGATCACCTATAAAAGAAGTCATTGAAAACGTTATCCCAGGTTCTGAGCAAAGAATTTACCTTGATAACTTCAAGCTTATCAAGCGCTTTGCTGGCTTTACGCCCACAACGTTTTTCTATGGCTCCGATGACAGCAGCCTTGGTAAAGTACACGTCTTTACCGATAGAAACGGTCGCTCTTTCATTGCCTTTGCTGCAGAGCTCAACTCCGAATTGGATGTAAAGTATGAGAAGGGCGACGACACGCGAAAAGACCCTAATCAAACAGACCCATCAGATGACAATACCGTTGATAACAACAATCAGTCTCAAGTGCAAGATAAAACGAAGCATGCCAACCCATCAAAGACTGTGAAGGGCACTACGTCCTCCAATAAACTGCCTCATACGGGAGATGCTTCCTCGGCCCTTGCTGCTGTTGCGTCAGTAATGAGTGCTGCCCTTGCGGGAGTCGGAAGCCTCTGTAAGCGCCGCAGTAAATAA
PROTEIN sequence
Length: 439
DTSPLQDALTEHKSQYEAAKAYGMKISEESSKAFEAEVAACDALLKKAQDGPSSVTQDEITAQRQKLNEAFGALKPLPYDRVALKAALDKAQKALNRIPELAKDGMGFEKSGFDAFYRSYLAAKDLDALEDLAFIIGPHEGGPLKTQRDFDTTADELNRLTQALNPIKMDLAKTDSLRETYFNALDVMPQEGFGWTPASRTAFYEALEHAKIMLNTLYPEQRDVDSALSQLQTATKALEETKLDTTKPKYKPFTLGIRYRHHNDSAPSALIDEYFEADGSPIKEVIENVIPGSEQRIYLDNFKLIKRFAGFTPTTFFYGSDDSSLGKVHVFTDRNGRSFIAFAAELNSELDVKYEKGDDTRKDPNQTDPSDDNTVDNNNQSQVQDKTKHANPSKTVKGTTSSNKLPHTGDASSALAAVASVMSAALAGVGSLCKRRSK*