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NECEvent2014_3_4_scaffold_1318_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(2433..2774)

Top 3 Functional Annotations

Value Algorithm Source
MiaB/RimO family radical SAM methylthiotransferase n=2 Tax=Atopobium RepID=N2BTN3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 228
  • Evalue 4.30e-57
MiaB/RimO family radical SAM methylthiotransferase {ECO:0000313|EMBL:EMZ41845.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 228
  • Evalue 5.90e-57
MiaB family RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 89.0
  • Bit_score: 102
  • Evalue 7.60e-20

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
CTGCAAAGCTGCATGAAGGTGAGCTTTGCAAAAATGCATATCTTTAGATATTCCAAACGTCCTGGGACACCTGCGGCGCGTATGCCCAATCAGGTTGATGCTCACGTAATGGCCGATCGCGCAAAACAAGCTCGTGAGTTGGCACTATCTATGCGCAAAGAAGTGGCTGCCGCGTTGGTAGGTACTACGGATATGATCATTTCACAGATGGATGGCAGGGGCATTTCTTCCGGTTTATTTGACGTGCAGTTTAACCATCCACTTCCTCTTGGCATGCATACCTGCACAATAACTGGGGTGCAGGGTACAACGCTTATGGCAGCTGCTTGCAAAAATAGCTAG
PROTEIN sequence
Length: 114
LQSCMKVSFAKMHIFRYSKRPGTPAARMPNQVDAHVMADRAKQARELALSMRKEVAAALVGTTDMIISQMDGRGISSGLFDVQFNHPLPLGMHTCTITGVQGTTLMAAACKNS*