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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_21

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(21427..22833)

Top 3 Functional Annotations

Value Algorithm Source
Arginine utilization regulatory protein RocR n=1 Tax=Clostridium ultunense Esp RepID=M1ZGM4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 471.0
  • Bit_score: 641
  • Evalue 5.10e-181
  • rbh
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:CCQ92932.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 471.0
  • Bit_score: 641
  • Evalue 7.10e-181
  • rbh
PAS modulated Fis family sigma-54-specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 471.0
  • Bit_score: 403
  • Evalue 1.10e-109

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAAAGATAACAATTATCTAACCAATATGAATTACGTAGATGCCATAATGATAGTAGATAGACATGGAAAAATTGTATATTCTGTGAGATATAATCCTAGATTTGATAGTAGTGGTTGTGAGGATGATCTTGAGAATATATTAAATAGAAATTTTTTAGAAGTATATTCTGGTATTAACCCTAAAGATAGTACTATGATTAGATGTATCAATGAAGGAAAGCCGATTTATTTATCAGAGCAGGTATTTAGTGATTATAAGGGAAGGATTATAAATACTCAAAACCTTACAATACCAATAATAAAAAGTGGAAAAATTCTTGGTGCAATAGAACTATCTAAAGATATAACGAAGATTGAAGAGCAGATAAAAAGTAAGGGTTATTCCTTTAAAACAGATTCCGTTAGATACAAAAGAATACAGGGACCTATATATACTTTTGAAGATATAATTACGTCAAATAAGGAAATGTTACATAATATAGAAAAGGCAAAAATAATATCAAATAATACGTCCTCAGTTATAGTCTATGGAGAGACAGGAACAGGTAAGGAGCTATACGTTCAATCAATTCACAATTATAGCAGTAGAAGAAATAAACCATTCATAGTACAGAACTGCGCTGCACTTCCTGAAAATCTATTTGAATCTATATTATTTGGCTCAGTTAAAGGAGCTTTTACTGGTGCTATAGATAAGCCAGGTTTATTTGAAGAAGCTCATGGGGGAACATTATTCTTAGATGAAGTGAATTCCATGCCTCTAAATCTACAAGCAAAATTACTTAGGGTATTACAGGATGGTAGGGTTCGTAGAGTAGGAGGTAGTCAAGAAAAGGAAGTAGACGTAAGAATAATTGCAGCAATGAATATAGAACCAGTCAAGGCTATGGAATTAGGACAAATTAGGGAGGATTTATTCTACAGGTTATGTGGAATAAGTTTAAAACTACTGCCACTTAGGGAACGAAAAGAAGATATAATGGTATATGTTGAATATTTTATAAATTTTTATAATAGGAAGTATAGCAAGGAGATAATTGGTATATCTAATGAAGTAATGAAATTGTTTCTTGACTACAATTGGCCCGGAAATGTAAGAGAACTTCAGCATGTAATAGAATCCTCAATTCATTTTGTAGGAAATAATGAAGAAATAAAATTAGATCATCTTCCAGTATATTTAAACGATAAGATTAATAAAGAGAATGATGATTTTATTGAGGATAATTTTGATATAAGTTGTGCCACATCTTTAGATGAAATGCTTGAAGGAATAGAAAAACAAATGATAAATAAAGCTTTAGAAAGTACAGGAGGTAATATAACTAGAGCTGCTTCATTATTAAAGATAACTAGACAAAGATTACACTATAAACTTGATAAATATGGAATAGATTTTAATTGA
PROTEIN sequence
Length: 469
MKDNNYLTNMNYVDAIMIVDRHGKIVYSVRYNPRFDSSGCEDDLENILNRNFLEVYSGINPKDSTMIRCINEGKPIYLSEQVFSDYKGRIINTQNLTIPIIKSGKILGAIELSKDITKIEEQIKSKGYSFKTDSVRYKRIQGPIYTFEDIITSNKEMLHNIEKAKIISNNTSSVIVYGETGTGKELYVQSIHNYSSRRNKPFIVQNCAALPENLFESILFGSVKGAFTGAIDKPGLFEEAHGGTLFLDEVNSMPLNLQAKLLRVLQDGRVRRVGGSQEKEVDVRIIAAMNIEPVKAMELGQIREDLFYRLCGISLKLLPLRERKEDIMVYVEYFINFYNRKYSKEIIGISNEVMKLFLDYNWPGNVRELQHVIESSIHFVGNNEEIKLDHLPVYLNDKINKENDDFIEDNFDISCATSLDEMLEGIEKQMINKALESTGGNITRAASLLKITRQRLHYKLDKYGIDFN*