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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_61

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(58258..58656)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSV4_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 125.0
  • Bit_score: 123
  • Evalue 1.30e-25
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 125.0
  • Bit_score: 123
  • Evalue 3.70e-26
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABR49272.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredige similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 125.0
  • Bit_score: 123
  • Evalue 1.80e-25

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Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 399
ATGTTAATAAATGATATTTTAAAAAATCCGTGGGACATTTTTAATGATGTTGATGAGGAAACAAAACAAGAATTTGAGTTATCTAATATGCTTGTTGATATTGCTTGTAAAATAATAAACTATAGACTAGACAATGATATGACTCAAAAGGATTTGGCTAATAAATTAGAAATAACTCAGGCGATGGTTTCAAAATTAGAAAGCGGAGAATATAATCCATCTATAGAGTTTCTATTTAAAATTTCTAAAAAACTAAATTGGAAATTTGAATTAACTTTTGAGGAAAATTATTCGGATGTATTAATTCAATATAATATGGAAAAAGAACAAGAAATATTAAATGAAGCAAATGAAAAAACTAGTGAAGAATTAGAATTATTAAAGGGGCTTGCAGCATAA
PROTEIN sequence
Length: 133
MLINDILKNPWDIFNDVDEETKQEFELSNMLVDIACKIINYRLDNDMTQKDLANKLEITQAMVSKLESGEYNPSIEFLFKISKKLNWKFELTFEENYSDVLIQYNMEKEQEILNEANEKTSEELELLKGLAA*