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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_20_102

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(103684..104307)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6Y8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 7.00e-90
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 9.80e-90
  • rbh
rpsD2; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 207.0
  • Bit_score: 321
  • Evalue 1.90e-85

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCAAGATATACAGGTCCAGTTTGCAGACTATGTCGTAGAGAAGGTATGAAACTATTTCTTAAAGGAGATAGATGCTATACAGATCAATGCGCGATAGTTAAAAGAAATTATGCACCAGGACAACACGGACAATCAAGAAAAAAGGTAACAGAGTATGGAATGCAGCTTAGAGAGAAACAGAAAGTTCGTAGATTCTATGGAATTTCTGAATCTCAAATGGTTAAATATTTCATTATGGCAGATAAAATGAGAGGAATAACAGGTGAAAACCTACTTAAAATACTTGAATTAAGATTAGACAATGTAGTATACAGAATGGGTTTTGCATCATCAAGGGCAGAAGCTAGACAATTAGTTACACATGGTCATTTCTTAGTCAATGGTTCAAAAGTAGATATACCATCTGTGATTCTTTCTGTTGGAGATATTGTTGAAATCAAAGAAAGAACTAGAGGTAGTGAAAAGATTAAAGATTTAGCAGCAAATCATAATGGCAACACTGTTAAATGGATAAGTGTGGATATTGATCAATTAAAGGGTAGCATAGTAGCTGAGCCAACTAGAGAAGATATAGATATACCAGTAGAAGAACACTTAATCGTTGAGTTATATTCTAAATAA
PROTEIN sequence
Length: 208
MARYTGPVCRLCRREGMKLFLKGDRCYTDQCAIVKRNYAPGQHGQSRKKVTEYGMQLREKQKVRRFYGISESQMVKYFIMADKMRGITGENLLKILELRLDNVVYRMGFASSRAEARQLVTHGHFLVNGSKVDIPSVILSVGDIVEIKERTRGSEKIKDLAANHNGNTVKWISVDIDQLKGSIVAEPTREDIDIPVEEHLIVELYSK*