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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_33_8

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 7819..11346

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 999.99
  • Bit_score: 1988
  • Evalue 0.0
  • rbh
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 999.99
  • Bit_score: 1901
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium ultunense Esp RepID=M1ZHV7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 999.99
  • Bit_score: 1989
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3528
TTGTTTGAATTCAATACATTTGATTCAATTAAAATTGGGCTGGCTTCACCAGAAAAAATCAGACAATGGTCTAAAGGAGAAGTAAAAAAACCTGAGACAATAAATTATAGAACATTGAAACCTGAGAAGGAAGGACTTTTTTGTGAAAAGATATTTGGACCTACAAAGGACTGGGAGTGCCATTGTGGGAAATATAAGAGAGTAAGGTATAAAGGTGTAGTATGTGATAGATGTGGGGTAGAAGTTACAAAATCCAAAGTTCGTAGAGAACGACTGGGACATATAGAATTAGCAGCTCCTGTGTCACATATATGGTATTTCAAAGGTATTCCAAGTAGGATGGGACTTCTAATGGATATGTCTCCGAGATCATTAGAAAAAGTTTTGTATTTTGCATCATATGTAGTTATAGATGGAGGAGATACTTCTTTATATGAAAAACAACTTTTAACTGAAACAGAATATAGAGAAGCCTATGAAAAATATCACAATAAATTTAAAGCGATGATGGGTGCAGAAGCCATAAAGGCATTGTTAGAGAAAATAGATTTAGATAAAGAGTCTAAAGAACTAAGACAACAGTTAAAAGATTCATCGGGTCAAAAGAAAATAAGAATAACCAGAAGACTAGAAGTTGTAGAGGCTTTTAGAAAGTCTGGAAATAGACCTGAATGGATGATATTAGATGTTATCCCAGTAATTCCTCCAGATCTTAGACCGATGGTACAGTTAGACGGAGGAAGGTTTGCTACATCTGATTTAAATGATTTATATAGAAGGGTAATAAATAGAAATAATAGACTTAAAAGACTGTTAGATTTGGGAGCACCAGATATTATTGTTAGAAATGAGAAGAGAATGCTTCAAGAAGCAGTAGATGCTCTTATAGATAATGGAAGACGTGGAAGACCTGTAACGGGACCAGGGAATAGACCTTTAAAATCTTTGTCAGATATGCTTAAGGGTAAGCAAGGAAGATTTAGACAGAACTTACTTGGTAAGAGGGTAGATTATTCAGGACGTTCAGTAATCGTAGTTGGTCCAGAGTTAAAATTCTATCAATGTGGAATACCAAAGAAAATGGCTCTTGAGTTATTTAAACCATTTGTAATGAAAAAGTTAGTAGAAGAAGGTCATGCTCATAATATAAAATCTGCTAAAAGAATGGTTGAAAGGGTAAAACCACAAGTATGGGATGTTCTAGACTCTGTAATAAAAGACCATCCAGTACTTTTAAACAGAGCTCCAACTCTTCATAGATTAGGAATTCAGGCATTTGAACCTGTTTTAGTTGAGGGAAAGGCCATTAAGTTACATCCTTTAGTATGTACAGCATATAATGCTGACTTTGATGGTGACCAAATGGCAGTACACGTACCTTTATCTACGGAGGCACAGGCAGAAGCAAGACTTTTAATGCTATCTACAAATAATATTCTTGCACCAAAAGATGGTAAACCAATTACCACTCCAACACAGGATATGGTTTTAGGAGCCTATTATCTATCCGTAGAATCTCCTGATGAACCTGGAGAGGGTATGATATTTAAAGATTTTGATGAAATGCTACATGCTTATTATAATGGATCCGTAGGATTACATGCTAGAGTAAAGGTAAGAATGAGACTAGATGAATCTGACACAGGAAAATTAGTTGAATCTACAGTAGGTAGATTTATATTAAACGAACATCTGCCACAGGATTTGGGATTTGTAGATAGAACTGTAGATAAGTATTCACTAGAAGTTGATATGCTTGTAAATAAAAAAGCATTAGGAAATATTATAGAAAAATGCTTTAGAAAGCATGGAAATGCAGTTACTGCAACTGTACTTGATCATATTAAAGAAACAGGCTTCCACTATTCAACAATAGGAGCGATATCTATTTCCATGGGAGATATATTTGTTCCTGAATCAAAACCTGAACTTCTAGCAAAAGCTCAAGAAGAAGTAGATAAATTTGAAAGATCTTATCGTAGAGGTCTTATATCAGATGAAGAAAGATATGAAAAAGTTATAGAAATTTGGAACAGAACTACTGACGATCTAACTGATAGATTGATGGACGGACTAGATCCGATGAATAATATTTATATCATGTCTCTATCAGGTGCTAGAGGTAGTGTAAACCAAATTAGGCAGCTTGCAGGCATGAGGGGACTTATGGCATCTGCATCAGGTAGAACCATTGAGATACCTATTAAGGCTAACTTTAGAGAAGGACTTAGTGTATTGGAATTCTTCGTTTCAACCCATGGTTCTAGAAAAGGGTTAGCAGATACAGCCCTTAGAACTGCAGACTCAGGATATTTAACTAGAAGATTAGTTGACGTAAGTCAGGATGTTATAGTAAGAGAGGTTGATTGTAAAACTGATGAATATCTGTTAGTTAGACCTTTTAAAGATGGAAGAGAAGTAATTGAAGAGTTACATGATAGAATTGATGGCAGATATGCTTTTGAAGATATAGTTAACCCCGAAACAGGAGAAATCATAGTAAAAGAAAATGAAATGATTTCAGGTATCCAAGCAGAATTAATTGAAAAAGTTGGGATAACAGAAGTTAAGGTTCGATCCGTATTGGGATGTAATGCTAAATATGGAGTATGTGCTCATTGTTATGGCAGAAATTTAGCAACAGGAGATGAAGTAAATATCGGAGAGGCTGTTGGAATCATTGCAGCTCAGTCAATTGGGGAGCCGGGTACACAGCTTACAATGCGTACATTCCATACAGGAGGAGTCGCAGGAGCAGATATTACTCAAGGTTTGCCTAGAGTTGAAGAGTTATTCGAGGCAAGAAAGCCAAAGGGGCTTGCTGTAATTGCAGAAAATTCCGGGGTAGTTAGTATAGAGGAAAGTAAAAGGAAAAAAGAAGTAATTATTACTTCATCCAATGGGGAATCTATGAACTACAATATAGTCTATGGATCTAGATTAAAAGTAAGGGCTGGAGATATTGTTGAAGCAGGAGATGAACTAACTGATGGTTCAGTAAATCCTCATGATATCCTTAAGATTAAAGGAATACAAGGAGTCCAAAATTATCTAGTTAAAGAGGTTCAGAGAGTTTATAGGTTGCAAGGTGTAGATATTAACGATAAACATATTGAAGTAATTGTTAAACAAATGCTAGCTAAGGTAAAAGTAGAAGAGGCAGGAGATACCCATATGTTACCTGGTTCTTTAGTGAACTCTTATGAATTTGAAGAAAATAATAGAATAGCTATCCAACAAGGATTAGAACCAGCAGTAGGAAGAAAAACTTTATTGGGTATTACGAAGGCTTCATTAGCTACTGATTCATTCTTATCGGCAGCTTCATTCCAGGAGACAACAAGAGTATTGACACAAGCTGCAATTGAAGGTAAAGAAGATTTTCTTCTAGGACTTAAGGAGAATGTTATTATTGGAAAACTTATCCCAGCGGGAACTGGAATGAAGAGATATAGAAATATAGAAATTTCTGGAGATGAAAATATTCAAATTTTAGAAGAATTAAATGTTGACAGTGAAAATAACTGA
PROTEIN sequence
Length: 1176
LFEFNTFDSIKIGLASPEKIRQWSKGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWECHCGKYKRVRYKGVVCDRCGVEVTKSKVRRERLGHIELAAPVSHIWYFKGIPSRMGLLMDMSPRSLEKVLYFASYVVIDGGDTSLYEKQLLTETEYREAYEKYHNKFKAMMGAEAIKALLEKIDLDKESKELRQQLKDSSGQKKIRITRRLEVVEAFRKSGNRPEWMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGIPKKMALELFKPFVMKKLVEEGHAHNIKSAKRMVERVKPQVWDVLDSVIKDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSTEAQAEARLLMLSTNNILAPKDGKPITTPTQDMVLGAYYLSVESPDEPGEGMIFKDFDEMLHAYYNGSVGLHARVKVRMRLDESDTGKLVESTVGRFILNEHLPQDLGFVDRTVDKYSLEVDMLVNKKALGNIIEKCFRKHGNAVTATVLDHIKETGFHYSTIGAISISMGDIFVPESKPELLAKAQEEVDKFERSYRRGLISDEERYEKVIEIWNRTTDDLTDRLMDGLDPMNNIYIMSLSGARGSVNQIRQLAGMRGLMASASGRTIEIPIKANFREGLSVLEFFVSTHGSRKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCKTDEYLLVRPFKDGREVIEELHDRIDGRYAFEDIVNPETGEIIVKENEMISGIQAELIEKVGITEVKVRSVLGCNAKYGVCAHCYGRNLATGDEVNIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAVIAENSGVVSIEESKRKKEVIITSSNGESMNYNIVYGSRLKVRAGDIVEAGDELTDGSVNPHDILKIKGIQGVQNYLVKEVQRVYRLQGVDINDKHIEVIVKQMLAKVKVEEAGDTHMLPGSLVNSYEFEENNRIAIQQGLEPAVGRKTLLGITKASLATDSFLSAASFQETTRVLTQAAIEGKEDFLLGLKENVIIGKLIPAGTGMKRYRNIEISGDENIQILEELNVDSENN*