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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_46

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(50412..51173)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 239.0
  • Bit_score: 338
  • Evalue 7.00e-90
  • rbh
rluB1; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.19) similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 242.0
  • Bit_score: 305
  • Evalue 1.30e-80
Pseudouridine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z6Z9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 239.0
  • Bit_score: 338
  • Evalue 5.00e-90
  • rbh

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
TTGATATTAGATAGGAAAGGTGATAGAATGTCAAAAAAAGAAAGACTTGATAAGATACTTGCTAATATGGGATATGGTAGTAGAAAAGATGTAAAAAAGTTTATAAAAGATGGTAGAGTGAAGGTAAATAATTCTATTATTTTAGATAATGAATTTAAAGTAAGCCCATACGAAGATGAAATTTTTTTGGGTGATGAAGAGGTTTTATATAGAGAATATATATACATTATGATGAATAAGCCTCAAGGTCTTGTTTCTTCTACAGATGATCCAAGAACTAGAACTGTAATAGATTTACTTCAAAGACAGCACTTAATTTATAAGCCTTTTCCAGTAGGGAGATTAGATAAGGATACAGAAGGATTGTTGATGATAAGCAATGATGGAAAACTGGCCCATGAATTATTATCTCCAAAAAAAGGTGTAAATAAAAAATATTATGTCCAAGTAGACGGATATGTAGAAGATAAATATATTGAAGTCTTTAAAGACGGAGTTACTTTGGATGATGGATATAAAACCTTACCAGCAGATTTAGAGATAATAAATGCTGATATTATATCTAAAGTATATCTAACTATACAAGAAGGTAAATTTCATCAGGTTAAAAGAATGTTTGAAAGTATTGGTATGAAAGTTTTATTTTTAAAGAGAGTTTCCATGGGACCTTTAAATTTAGATGAATCCTTGAGTCCAGGAGAGTATAGAGAACTAACAGAAAACGAGATAAATTTATTAAAAAGTCATATAAATGTGATATAA
PROTEIN sequence
Length: 254
LILDRKGDRMSKKERLDKILANMGYGSRKDVKKFIKDGRVKVNNSIILDNEFKVSPYEDEIFLGDEEVLYREYIYIMMNKPQGLVSSTDDPRTRTVIDLLQRQHLIYKPFPVGRLDKDTEGLLMISNDGKLAHELLSPKKGVNKKYYVQVDGYVEDKYIEVFKDGVTLDDGYKTLPADLEIINADIISKVYLTIQEGKFHQVKRMFESIGMKVLFLKRVSMGPLNLDESLSPGEYRELTENEINLLKSHINVI*