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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_65_15

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(17482..18039)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RmlC-type n=100 Tax=Clostridium difficile RepID=Q186J9_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 222
  • Evalue 3.80e-55
Transcriptional regulator, RmlC-type similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 222
  • Evalue 1.10e-55
Helix-turn-helix family protein {ECO:0000313|EMBL:EQI84976.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 222
  • Evalue 5.30e-55

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
TTGAACATAGATATAGACATAGGTACAAAAATAAAAGAATTAAGAAAGTTAAAAAAAATGAATATCTCTGATTTGGCCGATAATGCAGAGCTAAGCCCTGGTTTAATTAGTCAGATAGAAAGGAACATTGTTACTCCCTCTATAGTTTCCTTGTGGAAAATTGCACAATCTCTTGGTGTTTCTGTAGGATATTTTTTTGAAGAAGAAGCTAAAATCAATACTAGTCCTGTAGTGAAAAAAAATAGCAGAAAACGTATAATAGCTTCCAACAACAATGCTATTTATGAGTTATTATCTGCTGATCTCAATAGAAAAATTGAGTTTCTATATATTACTATTAAAGTTGGAGACTACTCTTCTAAGGATTTTGTAACCCACGAAGGAGAAGAATGTGGTCTTGTAATCAAAGGAAAATTAATGGTTAAAATGGAAAATGAAGAATATATCTTAGAAGAAGGAGATAGTATTTATTTTGACAGTACTATTCCACATAGATATATTAACGTAGGTGACGAAGTCTGCGAATCTATTTGGGCTATGACACCACCAAGTTTTTAG
PROTEIN sequence
Length: 186
LNIDIDIGTKIKELRKLKKMNISDLADNAELSPGLISQIERNIVTPSIVSLWKIAQSLGVSVGYFFEEEAKINTSPVVKKNSRKRIIASNNNAIYELLSADLNRKIEFLYITIKVGDYSSKDFVTHEGEECGLVIKGKLMVKMENEEYILEEGDSIYFDSTIPHRYINVGDEVCESIWAMTPPSF*