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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_65_18

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 20518..21075

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigV n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYX7_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 6.10e-77
sigV1; RNA polymerase sigma factor SigV similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 1.70e-77
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:AFS77616.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 8.50e-77

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
ATGAGCTCATATTTTATTTGCAAGGAGGAGGTTTCACTGGAAAAATTAGTTCTTAAAGCAATAAAGGGAGATGATGAAAGCTTCGGTCTCCTTATAAATAGCAAAAAAGAAGATTTATATAGAATGGCGTACAGTTATGTGCACAATGAACAGGATGCACTTGATATAGTAGGAGAGTCAGTATATAAAGCTTATATATCAATAAGCAAGTTAAAACAACCAGAATATTTTAACACATGGCTTGTTCGTATAGTTATTAATTGTTCAATAAACTTTATAAAGAAATCTAAGAAAATTTTATATATGGATAATGAGACTATGGAAAATATTTATCATAATAAAAATGATGTTTTGGAAAACATAGATTTAAAAGAAGCCCTAGAAAAGTTGGACTATAACCATAAGGCTGTGATAGTACTAAGATATTCTCAAGACTTGAAACTGAAGGAGATAGCCGAAATTCTAGATATTCCTTTAAGCACAGTAAAAACTCGACTTTATAAGGCAATTGAACTTTTAAAAATAGAACTTAAGGAGGGCGAAAATTTTGAAGAATAA
PROTEIN sequence
Length: 186
MSSYFICKEEVSLEKLVLKAIKGDDESFGLLINSKKEDLYRMAYSYVHNEQDALDIVGESVYKAYISISKLKQPEYFNTWLVRIVINCSINFIKKSKKILYMDNETMENIYHNKNDVLENIDLKEALEKLDYNHKAVIVLRYSQDLKLKEIAEILDIPLSTVKTRLYKAIELLKIELKEGENFEE*