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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_73_6

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(5071..5649)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK90_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 1.80e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 5.00e-56
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW20222.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremla similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 2.50e-55

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAATAAAAGACTTAATAAGAGGCAAATTCAGGCACAGATTACTTATGAAAATATCTACAATGCTGCCATGAGTTTAGTTGAAAAAAAAGGATTTGAAAATATTACTGTAGAGGAAATATGCACTAAGGCTGGTGTATCTGTAGGTTCATTTTATAACTATTTTAAATCAAAGCAAGATATATTGAATGAAATATTTAGAATAGCAGATGATTATTTCTTAAATACTGTTTCAAATGTGTCAACTGGACAAGATGCTTATGAAAATATAGTAAATTTCTTTGCACACTATGCTAAGTATTGTGAAGCTATAAAGATAGATCAATTAAAACAGATATATAGTACAAGTAATATTTTATTTATAGAAGAAGGTAGGCATATGCAATCTGTATTAAAAGATATAATAGATGCTGGAAAAGAATCGGGCCAAATAAATACAGATATGCAATCAGAGGAAATTGTAAGATATCTGTTTATTGCACTAAGAGGAGTAATATTTGATTGGTGTTTGCATGGTGGAAGCTATGATTTAGTTGAATTTGTTACTAATTATACAAGACGATTGATAAGAGTTATATAA
PROTEIN sequence
Length: 193
MNKRLNKRQIQAQITYENIYNAAMSLVEKKGFENITVEEICTKAGVSVGSFYNYFKSKQDILNEIFRIADDYFLNTVSNVSTGQDAYENIVNFFAHYAKYCEAIKIDQLKQIYSTSNILFIEEGRHMQSVLKDIIDAGKESGQINTDMQSEEIVRYLFIALRGVIFDWCLHGGSYDLVEFVTNYTRRLIRVI*