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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_4

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(2661..3215)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRY5_CLOPH similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 1.80e-44
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 5.00e-45
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 2.50e-44

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Taxonomy

Lachnoclostridium phytofermentans → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 555
ATGATAGATGATAAAATTCTTTATAAAAAATTTCTTGAAGGTAATATAACTGCTTTTGAAACCCTTGTACTTACTCACAAGGACAACTTAATATACTTTATTTCTCGATATACTGGAGATATCTTTATTGCTGAAGATATTGCTCAGGATGTATTTGCCTATGTCTATGTTTACAAGGAAAAATATAAATTTGACTATTCCTTTAAAACTTATATATATACATTAGGACGAAATAAGGCCATAGATTATGTAAGAAAGCAATCAAAGTTAAAAGTAATTCCCTTTGAAAGAGATAATGAAATATTATTAGATGAAGATAGTCTAGAAGAAAAAGTAATAAAAGATGAAGAAAAAAAACTCCTTCTTGAAAGTTTGAAAAAGTTAAAACCTGATTATGAAAAAGCCATTTATTTAGCTAACTTTGAAGAACTATCTTATGAAGAGATATCAAAAATTCTAGGAAAAACCTTAGGGCAAACAAGAGTATTGATCCATAGAGCTAGAAAAGCTCTTAAAGAAATATTGGAGAAGGGAGCTGGACATGATGAAAGATAA
PROTEIN sequence
Length: 185
MIDDKILYKKFLEGNITAFETLVLTHKDNLIYFISRYTGDIFIAEDIAQDVFAYVYVYKEKYKFDYSFKTYIYTLGRNKAIDYVRKQSKLKVIPFERDNEILLDEDSLEEKVIKDEEKKLLLESLKKLKPDYEKAIYLANFEELSYEEISKILGKTLGQTRVLIHRARKALKEILEKGAGHDER*