ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_77_10

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 12190..13089

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1THH8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 299.0
  • Bit_score: 347
  • Evalue 9.70e-93
  • rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyroso similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 299.0
  • Bit_score: 347
  • Evalue 1.40e-92
  • rbh
putative site-specific tyrosine recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 300.0
  • Bit_score: 287
  • Evalue 3.40e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
ATGAACTTACAATATTATCATGATGAATTTTTAGACTATATGAAAGCAGAAAAAAATGCTTCAGAAGCAACCATAACGAGTTATACTACGGATTTCAGGATTTTTAATGTTTTTTTGACTATTGGTGGTATTGAACCTAGGATTAATACTATCACAACACAAGTTTTGAGAAGATATGTAGTATATTTAAAACAGCATAAAAATTATAAAAATGAAACAGTAAGAAGGAAAATTAATTCATTATCATCTTTTTTTAAATTTTTATTAGAAACTGAATATATTGAAAAAAATCCTATGTTGCCCATTAAAGCACCTAAAAAGGAGCAAAACATTCCAATATATATCAAAGAAAATGAATTGACTAGATTACTTCAAGCACCAGAAAAATATGCCCGTTTTCCTGAACATAGACTAAGAGATAAAATAATGATTGAATTACTGGTATTTACAGGGGCTAGAAGATCTGAAGTATTAAGCTTAGATTTTGATAATGTAGATTTTCAAGCTAAAACTATCACAATTTTAAAAGCTAAAGGTAATAAACAAAGGATTGTTCCTTTAATAGAGCCACTAGCTACTGACCTTTGGGAATATCTACAAACTAGACTTCCTTTAACTAATCGAGCTATTCTTATTTCTGATCAAGGTAATAGAATGAGTGTTAGTAATTTTCAAAATCTTTTTAGAAGGTATTTAGAAAAATCTGGACTAGGTAACAAAGGTTATACTATTCATAAATGTAGGCACTCTTTTGCATCCTTGCTTCATCAAAACGGGGTTGATATAATTTCAATTAAAGAATTGCTCGGCCACGAAGATTTAAACTCCACTAAAATTTATACTCACACAAATGTTGATCATTTAAGAAAACAGGTAGAAAAATTTCCTGTAGGTTTATAA
PROTEIN sequence
Length: 300
MNLQYYHDEFLDYMKAEKNASEATITSYTTDFRIFNVFLTIGGIEPRINTITTQVLRRYVVYLKQHKNYKNETVRRKINSLSSFFKFLLETEYIEKNPMLPIKAPKKEQNIPIYIKENELTRLLQAPEKYARFPEHRLRDKIMIELLVFTGARRSEVLSLDFDNVDFQAKTITILKAKGNKQRIVPLIEPLATDLWEYLQTRLPLTNRAILISDQGNRMSVSNFQNLFRRYLEKSGLGNKGYTIHKCRHSFASLLHQNGVDIISIKELLGHEDLNSTKIYTHTNVDHLRKQVEKFPVGL*