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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_45_18

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(18947..19318)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKE0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 99
  • Evalue 3.30e-18
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EMS72680.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 99
  • Evalue 4.50e-18
DNA-directed RNA polymerase specialized sigma subunit, sigma24 similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 119.0
  • Bit_score: 96
  • Evalue 4.50e-18

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 372
ATGCGCAGGCTTCGTCATAATTGTGAAGGGGGCATAGTTTCATACATATGTAAATCCGTATATTCGAGCTATATTAATAAATCTAAGACTAACTGCAAATATTTCCAATCAACAATTCCATTTTCAGGACTAAATGAGAATGAAAAGTATTACGCAGAACTATCTTTGTCAACAGTTGATAGAGACGATGCTTTGTTAGTATCCAGCCTTAATGAAATTTTGAACCAGCATGAGTTTTGTATCATATATACGATTTATTTTTTGGGATACTCATCAGCGGATATTGCTCAATCAAGTGGTACGTCACGTCAAGCAGTTAACCAAACAAAACGTAGGGCTTTAGAAAAATTACGAAAAGCCTTTGTTGTTTAG
PROTEIN sequence
Length: 124
MRRLRHNCEGGIVSYICKSVYSSYINKSKTNCKYFQSTIPFSGLNENEKYYAELSLSTVDRDDALLVSSLNEILNQHEFCIIYTIYFLGYSSADIAQSSGTSRQAVNQTKRRALEKLRKAFVV*