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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_58_30

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 32183..32980

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=84022 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 264.0
  • Bit_score: 330
  • Evalue 2.60e-87
  • rbh
trpA; tryptophan synthase alpha chain (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 263.0
  • Bit_score: 305
  • Evalue 1.10e-80
Tryptophan synthase alpha chain n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=TRPA_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 301
  • Evalue 7.10e-79
  • rbh

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 798
ATGGACAGTAGGATAAAGAAAAAATTTGATGAAATTAAAGAGGAAAAAAGAAAAGCCTTGATTACTTATATTACATCAGGAGATCCTGCATTGGATAAAACCATAGAATTAGTTTTGGCAATGGAAAAAGCAGGAGCCGACATTATTGAATTAGGGATTCCATATTCAGATCCTTTAGCAGACGGGCCTGTTATACAGAGAGCTTCATCAAGGGCTTTAAGTCAAGGTACTAATGTGGAAACTATTTTTTCAATGGTTTCAGCACTAAGATGTAAAACGGAAATTCCTCTGATTTTCTTGGTGTATTATAATACGATTTTTTCTTATGGAGTAAGAAGATTTTTAAATGGATGTAAAAAATGTGGGATAGATGGTTTGATTATCCCAGACATTCCTTTGGAGGAGAGAGAAATATTAAACGAAATTATGAGGGATTATTCTATTGATTTAATAGTCCTGGTTGCTCCAACTTCTCATAGTCGTATAGAAGCAATAGTTAAAGAAGGAAAAGGATTTATTTATTGCATTTCTTCAAAGGGCATTACAGGAATGAGAGAATCCTTTGATGAAGGACTGGTAGATCTCTTGGAAGAAATAAAAAAACATTCAAACATTCCTACAGTCGTTGGTTTTGGTATATCTGATGTAAAGAGCATAAAGAAATTAAAGGATTTAGCTGATGGATTAATAGTTGGAAGTGCAATTGTTAAAGAAATAGAGAATGGAATAGAATTGGGCAATATTGAGGGAAGAGTTTTTGAGTTTGTAAAAAGTTTAAAAAAAGCAATGGATGAATAG
PROTEIN sequence
Length: 266
MDSRIKKKFDEIKEEKRKALITYITSGDPALDKTIELVLAMEKAGADIIELGIPYSDPLADGPVIQRASSRALSQGTNVETIFSMVSALRCKTEIPLIFLVYYNTIFSYGVRRFLNGCKKCGIDGLIIPDIPLEEREILNEIMRDYSIDLIVLVAPTSHSRIEAIVKEGKGFIYCISSKGITGMRESFDEGLVDLLEEIKKHSNIPTVVGFGISDVKSIKKLKDLADGLIVGSAIVKEIENGIELGNIEGRVFEFVKSLKKAMDE*