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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_58_92

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(119767..120189)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=204 Tax=Clostridium difficile RepID=C9XJN8_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 113.0
  • Bit_score: 100
  • Evalue 1.70e-18
phage regulatory protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 98
  • Evalue 1.40e-18
Phage regulatory protein {ECO:0000313|EMBL:CKH19264.1}; Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CDT17329.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 98
  • Evalue 6.70e-18

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 423
GTGGCAAGTATTGGTGAAAGAATATTAGAATTGAGAAAACAGTTTAATTTAAGTCAAAAAGAATTAGCTGAAAAAACAGGTATTACTGAAGCTAGTCTATCACGATATGAGAATAATTTGAGAGAGCCAAAAGCAGAAATAATCACAAGAATATCAGAAGTTCTCGAATGTTCCACTGACTATCTCCTTGGACGTACTAACAATAAAAAAGATTATACCAAATCCGATACTAACTTGTTCAATGATAATTTTAAATCTAAAGGATATAACGAAATAGAAGAGAAAATTAGGGAAAGATTGTTGAATGAAGGAATTATAGATAAAAATGAACCTATTACTAAAGATATGCTTGATAAAGTTTTAAAGTATGGTATAGAAGCTACTATAGAAATATTAAAATTAGAAAAGAAACTAGAAAAATAA
PROTEIN sequence
Length: 141
VASIGERILELRKQFNLSQKELAEKTGITEASLSRYENNLREPKAEIITRISEVLECSTDYLLGRTNNKKDYTKSDTNLFNDNFKSKGYNEIEEKIRERLLNEGIIDKNEPITKDMLDKVLKYGIEATIEILKLEKKLEK*