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NECEvent2014_3_5_scaffold_350_22

Organism: NECEvent2014_3_5_Citrobacter_KTE32-rel_52_101

partial RP 42 / 55 MC: 5 BSCG 39 / 51 ASCG 13 / 38 MC: 2
Location: comp(19455..23678)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2753
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2750
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=R8V023_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2755
  • Evalue 0.0
  • rbh

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4224
GTGAAAGATTTATTAAAGTTTCTGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCCTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAACCTGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGACTATGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGCGGTGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTACGCCGTGAGCGTATGGGCCACATCGAGCTGGCGTCTCCGACCGCTCACATCTGGTTCCTGAAATCTCTGCCGTCCCGTATCGGTCTGCTGCTCGATATGCCGCTGCGCGATATCGAACGCGTACTGTACTTCGAATCTTATGTGGTTATCGAAGGCGGTATGACTAACCTGGAACGTCAACAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTCGACGCGAAGATGGGTGCGGAAGCAATCCAGGCCCTGCTGAAGAGTATGGATCTGGAGCAAGAGTGCGAAACTCTGCGCGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAGAAGCTGACCAAACGTATCAAACTGCTGGAAGCATTCGTACAGTCTGGCAACAAGCCAGAGTGGATGATCCTGACCGTTCTGCCGGTTCTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCAACATCGGATCTGAACGATCTGTACCGTCGCGTGATCAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTTGACGCCCTGCTGGATAACGGTCGTCGTGGTCGTGCGATCACCGGTTCTAACAAACGTCCTCTGAAATCTTTGGCCGATATGATCAAAGGTAAACAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAACTGTTCAAACCGTTCATTTACGGCAAGCTGGAACTGCGTGGCCTGGCCACCACCATCAAAGCCGCTAAGAAAATGGTTGAGCGTGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAACACCCGGTACTGCTGAACCGTGCACCAACCCTGCACCGTCTGGGTATCCAGGCATTTGAACCGGTACTGATCGAAGGTAAAGCTATCCAGCTGCACCCGCTGGTTTGTGCGGCATATAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTGTCTCCGGCGAACGGCGAACCTATCATCGTTCCGTCTCAGGACGTTGTATTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCTGAGCGTATTTATCGCGCAGGTCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACTGAATACGAAAAAGATGAAAACGGCGAATTCGTTGCGCACACCAGCCTGAAAGACACGACCGTTGGTCGCGCCATTCTGTGGATGATCGTACCGAAAGGCCTGCCTTTCTCCATCGTCAACCAGGCGCTGGGCAAGAAAGCAATCTCCAAAATGCTGAACACCTGTTACCGCATTCTGGGCCTGAAGCCGACCGTTATCTTCGCTGACCAGACAATGTACACCGGCTTTGCTTATGCAGCGCGTTCAGGTGCATCTGTTGGTATTGATGACATGGTCATCCCAGAGAAGAAACACGAGATCATCTCTGAAGCGGAAGCTGAAGTTGCTGAGATCCAGGAGCAGTTCCAGTCTGGTCTGGTAACCGCGGGCGAACGCTATAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACCGAAACCGTGATTAACCGTGACGGCGTAGAAGAGCAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCAGCACAGATTCGTCAGCTGGCCGGTATGCGTGGTCTGATGGCTAAGCCAGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCTACTCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACAGCGAACTCCGGTTATCTGACTCGTCGTCTGGTTGACGTTGCGCAGGACTTGGTTGTTACTGAAGACGATTGCGGCACGCTGGAAGGCATCACCATGACCCCGGTTATCGAGGGTGGTGACGTTAAAGAACCGCTGCGCGATCGCGTTCTGGGTCGTGTGACTGCTGAAGACGTTCTGAAGCCGGGTACGGCGGATATTCTGGTTCCACGCAACACGCTGCTGCACGAACAGTGGTGTGACCTGCTGGAAGAGAACTCCGTTGACTCCGTCAAAGTCCGTTCCGTTGTATCCTGTGACACCGACTTTGGTGTATGTGCGCACTGCTATGGTCGTGACCTGGCGCGTGGCCACATCATCAATAAAGGTGAAGCAATCGGCGTTATCGCGGCACAGTCCATCGGTGAACCGGGTACACAGTTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAATCCAGCATCCAGGTGAAAAATAAAGGTAGCATCCGTCTGAGCAATGCGAAGTCGGTTGTTAACTCCAGCGGTAAACTGGTTATCACCTCACGTAACACCGAACTGAAACTGATCGACGAATTCGGCCGTACCAAAGAAAGCTATAAAGTGCCTTACGGCTCCGTTATGGCGAAAGGTGATGGCGAACAGGTTGCTGGCGGCGAAACCGTAGCGAACTGGGATCCGCACACCATGCCGGTTATCACCGAAGTGAGTGGTTTCGTCCGCTTCACTGACATGATCGACGGCCAGACCATTACTCGTCAGACCGACGAACTGACCGGTCTGTCTTCTCTGGTGGTTCTGGATTCTGCAGAACGTACTGCGGGTGGTAAAGACCTGCGTCCGGCACTGAAAATTGTTGATGCTCAGGGCAACGACGTTCTGATCCCAGGCACCGATATGCCTGCTCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGTTCTGGTGACACCCTGGCGCGTGTTCCGCAGGAATCCGGCGGTACCAAGGATATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGCATCATTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGAGCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTTGTTTCCGACGGTCCGGAAGCGCCGCACGACATCCTGCGTCTGCGTGGTGTGCATGCTGTAACTCGTTATATCGTTAACGAAGTTCAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAGCACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCCACCATCGAAAGCGCTGGTAGCTCCGACTTCCTGGAAGGCGAGCAGGTTGAATACTCCCGCGTCAAGATTGCTAACCGCGATCTGGAAGCGAACGGCAAAGTGGGTGCAACATTCTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCGACCGAGTCCTTCATCTCTGCAGCATCGTTCCAGGAAACCACGCGTGTCCTGACCGAAGCCGCTGTTGCAGGTAAACGTGATGAACTGCGCGGTCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCGGGTACCGGTTATGCGTACCACCAGGATCGTATGCGCCGCCGCGCAGCGGGCGAACTGCCAGCTGCTCCGCAGGTGACTGCTGAAGATGCGTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGCCTGGGTGGTTCTGACAACGATTAA
PROTEIN sequence
Length: 1408
VKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDENGEFVAHTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRLSNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRDLEANGKVGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVTAEDASASLAELLNAGLGGSDND*