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NECEvent2014_3_5_scaffold_72_31

Organism: NECEvent2014_3_5_Paenibacillus_dendritiformis-rel_55_56

near complete RP 48 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 2
Location: 33006..33755

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SIS7_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 191.0
  • Bit_score: 386
  • Evalue 1.60e-104
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:EHQ61031.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C45 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 191.0
  • Bit_score: 386
  • Evalue 2.20e-104
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 189.0
  • Bit_score: 208
  • Evalue 2.20e-51

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Taxonomy

Paenibacillus dendritiformis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGCTAAACAGGTATACGGACAATTATAAAGAAGTTCAACTACGGCAATCGCGTATAGCCGTACGAAACTATACTACCCCAAAATTTATTTCATTTTCTTCGGGTTTCCATCGAACCTTTTCGAATGAACGTGGCAATATAGAGTGTAAGCTTACGAAGGAGGGCCCTTTTTTCATGGAAGACATCAATATAGAGCATTGGATTGAACGGATGAAGGAGGGGGATCCATCTGGATTTCAAGTAATTTATGAATGGTCATTCCCTGAAATCTACCGCTCCGTTGTCTTTTTGATGACGGAAAAAAATGAAATCGAAGATGTAATGAACGAAATTTATTTTCAGCTGTGGCGCTCCATCGACAGTTATGATGCAAAACGTCCCTTCCGCTTCTGGATGCATGGCCTTGTGCTGAAGCAAATACAGAAGTGGAGGACCAAAAGCTGGAGGAGGTTCCGAATCTTAGAGAAGAAGCGGCTCTTGGAGGTGGAAGAGCATATTTTCTCGGATCGTCAGGTGCTTGAGGCCGAGACGCATCAGGAGATGCTGACCATCGTTCATCAGTTATCGTACAAACTTCGCACGGTGATTATTTTGCGCTATTATCACGACTATACATTCGATGAAATCGCTGAATTGCTGAACATCCCTGCAGGTACGGTCAAATCGAGACATCACGCAGCACTGGAGAAGCTTCGCAAGCTCAGCCCATATTGTGAAGCAGTAAAGGAGAAAGAACTTTATGTCCATTGA
PROTEIN sequence
Length: 250
MLNRYTDNYKEVQLRQSRIAVRNYTTPKFISFSSGFHRTFSNERGNIECKLTKEGPFFMEDINIEHWIERMKEGDPSGFQVIYEWSFPEIYRSVVFLMTEKNEIEDVMNEIYFQLWRSIDSYDAKRPFRFWMHGLVLKQIQKWRTKSWRRFRILEKKRLLEVEEHIFSDRQVLEAETHQEMLTIVHQLSYKLRTVIILRYYHDYTFDEIAELLNIPAGTVKSRHHAALEKLRKLSPYCEAVKEKELYVH*