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NECEvent2014_3_5_scaffold_460_12

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: comp(13165..14547)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=3 Tax=Clostridium butyricum RepID=B1R143_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 460.0
  • Bit_score: 894
  • Evalue 4.30e-257
  • rbh
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEP55541.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 460.0
  • Bit_score: 894
  • Evalue 6.00e-257
rpoN; putative RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 462.0
  • Bit_score: 681
  • Evalue 1.60e-193

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGAATCTGGATTATAGTATGAAAATGACGCAGCAGCAAAGGATGATTATGACTCAGAATATGCAGCAGTCAATTAAGCTTTTACAAATGTCTCTTCATGATTTAAGAGAATATATAGATAATGAATATTCAGAAAATCCTATTTTAGAAATAAATGAACAGAGCAGCCAAAGCGAAGAAATACAAAACAATAATTTAATAGATAAATATAATGCTGAAAAAATAGCAGAAGAAATGGATTATGATAGTTACAAAGATAAGCCTGAAAGATCATACTCAAATGAAGATGTTTCACCATTTAATTTTATAGAGGAAAAGAAATCATTAAAAGAATATCTATACGAACAGTTATTAGAATCTGATGAAGAACAGTATACAATAATGATAGCTAAATATATTATTGAATCTTTGGATGGAAGAGGATATTTAGAAATATCAATGGAAGAATTAGCGACGGAATTAAGAATTTCTACAGATGACGTTGAAAAAGGATTAAAACTTGTTCAATCATTAGAACCTTATGGAATTGGTGCAAGAAATATAAAAGAATGTTTAATTATACAGAGTATTAATCTAAATATATTAGATGATAATATAGAAAGAATAATTTTAGATCATCTTGAAGAAGTAGCGGAAAACAAATATGAACTTATAGGAAAAGCATTGAAAATTTCACCTAGAGAGGCTCAAAGATATGGTGATATAATTAAAAAGTTAGAACCGAAACCTTCAAGAGGTTTTTATACGGGAGAAGAAGTAAGTTATATAATTCCTGATGCTGAAATCAAGAATATAGATGGAGAATTTTTTATCATAATGAATGAAGGCGTGCTTCCAAAGCTTATAATAAATAAAACTTACAGAGATGTTTTGAAAAATGGAAAAGATACTGAAATAAATAGCTATGTAAAAGAAAAAATTAATAAAGCAATGTTTTTGATAAAGGCTATAGATGATAGAAAAAATACTTTATATAAAGTTTTGGAATGTCTGATTGATAAACAAAAAGAATTTTTTGAAAGAGGATATTCATATATTAAGCCTTTAACATTACGAGAAGTTTCAAGTGAGCTGGATGTTCATGATTCTACTATAAGCAGAACCATTAAAGATAAGTATATATTGACAAGTTATGGAACTATTAAAATAAAGGATCTATTTCCAAGCGGAATAACTAATAATACATTAGAAGATTTATCTACTGTAAAAATAAAAAATGAAATAAAAAAGATTATACAAGAGGAAAATAAGAGCAAGCCATTATCAGATCAGTCTATAAGTCTTATATTAAAGGAGAATAATATTAAAATATCGAGACGAACAGTTGCAAAATATAGGGAAGAACTTGGGATAAAATCATCTTCTATGAGGAAAAGGTTATAA
PROTEIN sequence
Length: 461
MNLDYSMKMTQQQRMIMTQNMQQSIKLLQMSLHDLREYIDNEYSENPILEINEQSSQSEEIQNNNLIDKYNAEKIAEEMDYDSYKDKPERSYSNEDVSPFNFIEEKKSLKEYLYEQLLESDEEQYTIMIAKYIIESLDGRGYLEISMEELATELRISTDDVEKGLKLVQSLEPYGIGARNIKECLIIQSINLNILDDNIERIILDHLEEVAENKYELIGKALKISPREAQRYGDIIKKLEPKPSRGFYTGEEVSYIIPDAEIKNIDGEFFIIMNEGVLPKLIINKTYRDVLKNGKDTEINSYVKEKINKAMFLIKAIDDRKNTLYKVLECLIDKQKEFFERGYSYIKPLTLREVSSELDVHDSTISRTIKDKYILTSYGTIKIKDLFPSGITNNTLEDLSTVKIKNEIKKIIQEENKSKPLSDQSISLILKENNIKISRRTVAKYREELGIKSSSMRKRL*